RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 RAB40CQ96S21 281 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 MARVELD1Q9BSK0 173 aa12.53□□□□□ -0.4
HMGN1-214ENST00000482733 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
HMGN1-214ENST00000482733 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGN1-214ENST00000482733 IZUMO1RA6ND01 250 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 C5orf51A6NDU8 294 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 FAM25EA8MYX2 175 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 SSSCA1O60232 199 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 SCGB1D2O95969 90 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 IGKV1-17P01599 117 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 YPEL3P61236 119 aaPredicted RBP12.52□□□□□ -0.41
HMGN1-214ENST00000482733 SPANXN5Q5MJ07 72 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 LAMTOR1Q6IAA8 161 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.41
HMGN1-214ENST00000482733 NPIPB3Q92617 1050 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 ACY3Q96HD9 319 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 SMPXQ9UHP9 88 aa12.52□□□□□ -0.41
HMGN1-214ENST00000482733 IGHV3OR16-8A0A075B7F1 116 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 IGHV7-4-1A0A0J9YVY3 117 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 ZNF785A8K8V0 405 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 CCSO14618 274 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 TAS2R30P59541 319 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 TIGITQ495A1 244 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 GSG1LQ6UXU4 331 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 Q8WTZ3 238 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 ZFAND3Q9H8U3 227 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 PSENENQ9NZ42 101 aa12.51□□□□□ -0.41
HMGN1-214ENST00000482733 ZNF207O43670 478 aaKnown RBP12.5□□□□□ -0.41
HMGN1-214ENST00000482733 GAMTQ14353 236 aa12.5□□□□□ -0.41
HMGN1-214ENST00000482733 Q8N1Y9 231 aa12.5□□□□□ -0.41
HMGN1-214ENST00000482733 WDR89Q96FK6 387 aaPredicted RBP12.5□□□□□ -0.41
HMGN1-214ENST00000482733 B9D2Q9BPU9 175 aa12.5□□□□□ -0.41
HMGN1-214ENST00000482733 SORL1Q92673 2214 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 H3BP45 60 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 CHEK1O14757 476 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 TSC22D2O75157 780 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 MBPP02686 304 aaPredicted RBP12.49□□□□□ -0.41
HMGN1-214ENST00000482733 CD5P06127 495 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 FABP1P07148 127 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 NPPCP23582 126 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 METTL26Q96S19 204 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 RHPN1-AS1Q9BWJ2 59 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 TMEM231Q9H6L2 316 aa12.49□□□□□ -0.41
HMGN1-214ENST00000482733 A0A1W2PS18 150 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 A8MZ25 164 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 PRSS46E5RG02 174 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 L7N2F9 121 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 TSPAN4O14817 238 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 PTTG1O95997 202 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 TOMM40O96008 361 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 RD3LP0DJH9 198 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 PAX9P55771 341 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 CD81P60033 236 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 VAMP2P63027 116 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 NARS2Q96I59 477 aaKnown RBP12.48□□□□□ -0.41
HMGN1-214ENST00000482733 SPAG8Q99932 426 aaPredicted RBP12.48□□□□□ -0.41
HMGN1-214ENST00000482733 RCL1Q9Y2P8 373 aaKnown RBP12.48□□□□□ -0.41
HMGN1-214ENST00000482733 DNAH9Q9NYC9 4486 aa12.48□□□□□ -0.41
HMGN1-214ENST00000482733 SCAF4O95104 1147 aaKnown RBP12.47□□□□□ -0.41
HMGN1-214ENST00000482733 PVALBP20472 110 aaPredicted RBP12.47□□□□□ -0.41
HMGN1-214ENST00000482733 TMEM14EPQ6UXP3 125 aa12.47□□□□□ -0.41
HMGN1-214ENST00000482733 NEURL2Q9BR09 285 aa12.47□□□□□ -0.41
HMGN1-214ENST00000482733 VSIRQ9H7M9 311 aa12.47□□□□□ -0.41
HMGN1-214ENST00000482733 SELENOKQ9Y6D0 94 aa12.47□□□□□ -0.41
HMGN1-214ENST00000482733 C7orf66A4D0T2 115 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 K7EPK0 472 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 IGHV4-30-4P0DP06 118 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 CRYBB3P26998 211 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 THAP8Q8NA92 274 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 RNF2Q99496 336 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 TRGV9Q99603 122 aa12.46□□□□□ -0.41
HMGN1-214ENST00000482733 LSM5Q9Y4Y9 91 aaKnown RBP12.46□□□□□ -0.41
HMGN1-214ENST00000482733 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 GOSR2O14653 212 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 IL4P05112 153 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 NHLRC4P0CG21 123 aaPredicted RBP12.45□□□□□ -0.42
HMGN1-214ENST00000482733 PSG1P11464 419 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 IL15RAQ13261 267 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 ACOT7LQ6ZUV0 252 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 OR10P1Q8NGE3 313 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 OR51G1Q8NGK1 321 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 ST8SIA2Q92186 375 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 GRAMD2BQ96HH9 432 aa12.45□□□□□ -0.42
HMGN1-214ENST00000482733 IGKV1D-37A0A075B6S9 117 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 IGHV3OR16-13A0A075B7E8 117 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 IGHV3-74A0A0B4J1X5 117 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 OR4C46A6NHA9 309 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 PMS2P5A8MQ11 134 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 FNDC10F2Z333 226 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 SSNA1O43805 119 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 CFDP00746 253 aaPredicted RBP12.44□□□□□ -0.42
HMGN1-214ENST00000482733 HNRNPCP07910 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGN1-214ENST00000482733 CD7P09564 240 aa12.44□□□□□ -0.42
HMGN1-214ENST00000482733 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms