RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
RBM39-233ENST00000482563 MRPL16Q9NX20 251 aaKnown RBP4.54□□□□□ -1.68
RBM39-233ENST00000482563 SPATA31E1Q6ZUB1 1445 aa4.54□□□□□ -1.68
RBM39-233ENST00000482563 SMG6Q86US8 1419 aaKnown RBP4.54□□□□□ -1.68
RBM39-233ENST00000482563 FER1L6Q2WGJ9 1857 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 A0A087X0T9 212 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 K7ERJ3 54 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 K7ERU9 68 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 TSPAN19P0C672 248 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 FABP2P12104 132 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 CSRP1P21291 193 aaKnown RBP4.53□□□□□ -1.68
RBM39-233ENST00000482563 YPEL3P61236 119 aaPredicted RBP4.53□□□□□ -1.68
RBM39-233ENST00000482563 FUT5Q11128 374 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 FOXF1Q12946 379 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 PHF5AQ7RTV0 110 aaKnown RBP4.53□□□□□ -1.68
RBM39-233ENST00000482563 LYZL2Q7Z4W2 148 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 MSRB3Q8IXL7 192 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 TAF9BQ9HBM6 251 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 CNTLNQ9NXG0 1405 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 TRAPPC8Q9Y2L5 1435 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 A2MP01023 1474 aa4.53□□□□□ -1.68
RBM39-233ENST00000482563 ZNF638Q14966 1978 aaKnown RBP4.53□□□□□ -1.68
RBM39-233ENST00000482563 IGLV4-69A0A075B6H9 119 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 IGHV3-15A0A0B4J1V0 119 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 GGCTO75223 188 aaKnown RBP4.52□□□□□ -1.69
RBM39-233ENST00000482563 CST7O76096 145 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 HIST1H4AP62805 103 aaKnown RBP4.52□□□□□ -1.69
RBM39-233ENST00000482563 C2orf83Q53S99 150 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 TMEM69Q5SWH9 247 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 ZNF660Q6AZW8 331 aaPredicted RBP4.52□□□□□ -1.69
RBM39-233ENST00000482563 LINC00305Q7Z4B0 112 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 RNF175Q8N4F7 328 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 PRG4Q92954 1404 aaPredicted RBP4.52□□□□□ -1.69
RBM39-233ENST00000482563 OSTCQ9NRP0 149 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 CDC42BPBQ9Y5S2 1711 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 RTL9Q8NET4 1388 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 NPYP01303 97 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 PAEPP09466 180 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 Q6ZQT7 251 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 MIR17HGQ75NE6 70 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 ZNF695Q8IW36 515 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 HIST3H2BBQ8N257 126 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 RPRMLQ8N4K4 120 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 C3orf56Q8N813 242 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 MND1Q9BWT6 205 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 RPS10P5Q9NQ39 176 aa4.52□□□□□ -1.69
RBM39-233ENST00000482563 ERBINQ96RT1 1412 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 PCM1Q15154 2024 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 FAM25AB3EWG3 89 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 FAM25CB3EWG5 89 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 FAM25GB3EWG6 89 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 HBBP68871 147 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 MIAQ16674 131 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 DEFB128Q7Z7B8 93 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 TRAPPC6BQ86SZ2 158 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 TMEM106AQ96A25 262 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 AP1S3Q96PC3 154 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
RBM39-233ENST00000482563 N4BP2Q86UW6 1770 aaPredicted RBP4.51□□□□□ -1.69
RBM39-233ENST00000482563 SYNJ1O43426 1573 aa4.51□□□□□ -1.69
RBM39-233ENST00000482563 MED1Q15648 1581 aaPredicted RBP4.51□□□□□ -1.69
RBM39-233ENST00000482563 EML6Q6ZMW3 1958 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 CEP164Q9UPV0 1460 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 ANKRD31Q8N7Z5 1873 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 TRPM3Q9HCF6 1732 aaPredicted RBP4.5□□□□□ -1.69
RBM39-233ENST00000482563 C19orf84I3L1E1 186 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 AZU1P20160 251 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 KLF14Q8TD94 323 aaPredicted RBP4.5□□□□□ -1.69
RBM39-233ENST00000482563 GNG8Q9UK08 70 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 TOPBP1Q92547 1522 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 MRC2Q9UBG0 1479 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 NALCNQ8IZF0 1738 aa4.5□□□□□ -1.69
RBM39-233ENST00000482563 TXNDC9O14530 226 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 CISD3P0C7P0 127 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 XCL1P47992 114 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 AKR1C1Q04828 323 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 OCIAD2Q56VL3 154 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 C22orf39Q6P5X5 142 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 BPIFB6Q8NFQ5 453 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 PFN4Q8NHR9 129 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 HIST1H2BLQ99880 126 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 TCEAL7Q9BRU2 100 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 TCEAL2Q9H3H9 227 aaPredicted RBP4.49□□□□□ -1.69
RBM39-233ENST00000482563 FOCADQ5VW36 1801 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 FGD6Q6ZV73 1430 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 A0A1W2PQD3 144 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 GRIFINA4D1Z8 144 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 H3BT86 120 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 IGHV3-53P01767 116 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 SMIM6P0DI80 62 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 RPL22P35268 128 aaKnown RBP4.49□□□□□ -1.69
RBM39-233ENST00000482563 SUPT4H1P63272 117 aaKnown RBP4.49□□□□□ -1.69
RBM39-233ENST00000482563 CCSMST1Q4G0I0 132 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 PDZD9Q8IXQ8 264 aa4.49□□□□□ -1.69
RBM39-233ENST00000482563 Q8NDZ9 215 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms