RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 LRTM2Q8N967 370 aa12.34□□□□□ -0.43
VAMP4-204ENST00000482519 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
VAMP4-204ENST00000482519 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
VAMP4-204ENST00000482519 GGTLC1Q9BX51 225 aa12.34□□□□□ -0.43
VAMP4-204ENST00000482519 PAIP2BQ9ULR5 123 aaKnown RBP12.34□□□□□ -0.43
VAMP4-204ENST00000482519 DFFBO76075 338 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 IGKV1-17P01599 117 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 IAPPP10997 89 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 OR10J1P30954 320 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 LILRB2Q8N423 598 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 Q8WTZ3 238 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 NPIPB3Q92617 1050 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 METTL26Q96S19 204 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 TMED3Q9Y3Q3 217 aa12.33□□□□□ -0.44
VAMP4-204ENST00000482519 C9orf170A2RU37 121 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 C3orf84H3BNL1 204 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 PITX3O75364 302 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 IGLC1P0CG04 106 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 UBE2MP61081 183 aaKnown RBP12.32□□□□□ -0.44
VAMP4-204ENST00000482519 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 APRG1Q8IVJ8 170 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 OR1S2Q8NGQ3 325 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 MAGT1Q9H0U3 335 aa12.32□□□□□ -0.44
VAMP4-204ENST00000482519 DNASE2O00115 360 aaPredicted RBP12.31□□□□□ -0.44
VAMP4-204ENST00000482519 LYL1P12980 280 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
VAMP4-204ENST00000482519 C4orf46Q504U0 113 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 FAM90A2PQ658T7 463 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 NARS2Q96I59 477 aaKnown RBP12.31□□□□□ -0.44
VAMP4-204ENST00000482519 TMEM231Q9H6L2 316 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 VSIRQ9H7M9 311 aa12.31□□□□□ -0.44
VAMP4-204ENST00000482519 A0A1W2PS18 150 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 MED6O75586 246 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 ADAP1O75689 374 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 CD5P06127 495 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 OR4E1P0C645 316 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 SLC25A6P12236 298 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 RPL35AP18077 110 aaKnown RBP12.3□□□□□ -0.44
VAMP4-204ENST00000482519 BTCP35070 178 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 COQ8AQ8NI60 647 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 C7orf50Q9BRJ6 194 aaKnown RBP12.3□□□□□ -0.44
VAMP4-204ENST00000482519 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 EDA2RQ9HAV5 297 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 RABAC1Q9UI14 185 aa12.3□□□□□ -0.44
VAMP4-204ENST00000482519 WRBO00258 174 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 RD3LP0DJH9 198 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 CRYBB3P26998 211 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 APOC4P55056 127 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-204ENST00000482519 YPEL3P61236 119 aaPredicted RBP12.29□□□□□ -0.44
VAMP4-204ENST00000482519 RAB11AP62491 216 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 DHRS2Q13268 280 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 ZNF124Q15973 351 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 ZFAND6Q6FIF0 208 aa12.29□□□□□ -0.44
VAMP4-204ENST00000482519 DNAH7Q8WXX0 4024 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 FAM90A26D6RGX4 464 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 SYNGR2O43760 224 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 IFNA21P01568 189 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 IL4P05112 153 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 P2RY1P47900 373 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 CMC4P56277 68 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-204ENST00000482519 CASC10Q5T4H9 136 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 LYG2Q86SG7 212 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 STXBP6Q8NFX7 210 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 GRAMD2BQ96HH9 432 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 SLC35E1Q96K37 410 aa12.28□□□□□ -0.44
VAMP4-204ENST00000482519 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
VAMP4-204ENST00000482519 ZFP92A6NM28 416 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 MPTX1A8MV57 137 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 PLA2G10O15496 165 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 LYRM1O43325 122 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 GPX4P36969 197 aaPredicted RBP12.27□□□□□ -0.45
VAMP4-204ENST00000482519 RPP30P78346 268 aaKnown RBP12.27□□□□□ -0.45
VAMP4-204ENST00000482519 GAMTQ14353 236 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 MAP6D1Q9H9H5 199 aa12.27□□□□□ -0.45
VAMP4-204ENST00000482519 KMT2CQ8NEZ4 4911 aaKnown RBP12.27□□□□□ -0.45
VAMP4-204ENST00000482519 TOMM40O96008 361 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 HNRNPCP07910 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
VAMP4-204ENST00000482519 PSG1P11464 419 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 USF2Q15853 346 aaPredicted RBP12.26□□□□□ -0.45
VAMP4-204ENST00000482519 SPANXN5Q5MJ07 72 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 STPG3Q8N7X2 389 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 PBDC1Q9BVG4 233 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 C20orf85Q9H1P6 137 aa12.26□□□□□ -0.45
VAMP4-204ENST00000482519 TRAV6A0A075B6T7 132 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 H3BP45 60 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 ZNF90Q03938 601 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 DEFB135Q30KP9 77 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 CNPY1Q3B7I2 92 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 LEMD1Q68G75 181 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 FAM24BQ8N5W8 94 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 OR51G1Q8NGK1 321 aa12.25□□□□□ -0.45
VAMP4-204ENST00000482519 SCGB1D2O95969 90 aa12.24□□□□□ -0.45
VAMP4-204ENST00000482519 NKX2-1P43699 371 aaPredicted RBP12.24□□□□□ -0.45
VAMP4-204ENST00000482519 EIF2B2P49770 351 aaKnown RBP12.24□□□□□ -0.45
VAMP4-204ENST00000482519 DEFB131AP59861 70 aa12.24□□□□□ -0.45
VAMP4-204ENST00000482519 POLR2GP62487 172 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms