RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TMEM231Q9H6L2 316 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 NEK6Q9HC98 313 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 NINJ2Q9NZG7 142 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 NUFIP1Q9UHK0 495 aaKnown RBP1.19□□□□□ -2.22
USH2A-204ENST00000481786 JPT1Q9UK76 154 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 KLK9Q9UKQ9 250 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 SNX12Q9UMY4 172 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 UTP11Q9Y3A2 253 aaKnown RBP1.19□□□□□ -2.22
USH2A-204ENST00000481786 GOLT1BQ9Y3E0 138 aa1.19□□□□□ -2.22
USH2A-204ENST00000481786 SAMHD1Q9Y3Z3 626 aaKnown RBP1.19□□□□□ -2.22
USH2A-204ENST00000481786 IGLV4-69A0A075B6H9 119 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 A0A096LPF7 62 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TRAV14DV4A0A0A6YYC5 116 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TRAV26-2A0A0B4J265 109 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 IGKV1-12A0A0C4DH73 117 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 A0A0J9YY99 117 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 RBFOX3A6NFN3 312 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 FAM74A7A6NL05 159 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 H3BMM0 161 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ZNF701M0R085 212 aaPredicted RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 AIPO00170 330 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 COPEO14579 308 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TAAR5O14804 337 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 FFAR1O14842 300 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 YPEL1O60688 119 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ZNF780AO75290 641 aaPredicted RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 IGKV1D-12P01611 117 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 HBZP02008 142 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 APOA2P02652 100 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TTRP02766 147 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 MT-ND4P03905 459 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 EIF4EP06730 217 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 CRYGDP07320 174 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 CRYGAP11844 174 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 SPI1P17947 270 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TCP1P17987 556 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 SRMP19623 302 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 CCL1P22362 96 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 PRKACBP22694 351 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TSPOP30536 169 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 PPP1CCP36873 323 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 OMPP47874 163 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 POLR2JP52435 117 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 DGCR6Q14129 220 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 LAGE3Q14657 143 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TNXAQ16473 311 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ZNF829Q3KNS6 432 aaPredicted RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 FAM74A3Q4VXF1 159 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 LINC01590Q5TEZ4 76 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 KDM4DQ6B0I6 523 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ELP2Q6IA86 826 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 SPINK6Q6UWN8 80 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 LINC01551Q86U37 167 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 C1orf158Q8N1D5 194 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 LINC01561Q8N1V8 128 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ZNF664Q8N3J9 261 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 STX19Q8N4C7 294 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 MREGQ8N565 214 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 MS4A15Q8N5U1 240 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 EIF1ADQ8N9N8 165 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 CCDC54Q8NEL0 328 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 OR6N2Q8NGY6 317 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ZNF502Q8TBZ5 544 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 FANK1Q8TC84 345 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 THEM6Q8WUY1 208 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 ACOT12Q8WYK0 555 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 PP6455Q8WZ26 134 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 RPUSD4Q96CM3 377 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 DGCR14Q96DF8 476 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 OR10C1Q96KK4 312 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 NSMCE2Q96MF7 247 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 YPEL2Q96QA6 119 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 C7orf50Q9BRJ6 194 aaKnown RBP1.18□□□□□ -2.22
USH2A-204ENST00000481786 LINC00467Q9BRT7 94 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 MROQ9BYG7 248 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 RAB17Q9H0T7 212 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 IFI27L2Q9H2X8 130 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 VAPAQ9P0L0 249 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 RABAC1Q9UI14 185 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 PSORS1C2Q9UIG4 136 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 TRAPPC2LQ9UL33 140 aa1.18□□□□□ -2.22
USH2A-204ENST00000481786 DSCAML1Q8TD84 2053 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 IGLV11-55A0A075B6I3 123 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 A0A096LNJ9 63 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 IGHV3-49A0A0A0MS15 119 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 A0A0G2JRQ6 117 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 A0A1B0GTI1 187 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 IBA57-AS1B1ANH7 110 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 H3BMQ9 156 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 ITGB1BP1O14713 200 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 NUPL2O15504 423 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 CYB5BO43169 146 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 DENRO43583 198 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 ZNF207O43670 478 aaKnown RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 ISG15P05161 165 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 ZNF688P0C7X2 276 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 OCM2P0CE71 109 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 OCMP0CE72 109 aaPredicted RBP1.17□□□□□ -2.22
USH2A-204ENST00000481786 DEFA4P12838 97 aa1.17□□□□□ -2.22
USH2A-204ENST00000481786 HLA-DRB4P13762 266 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms