RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 ZNF502Q8TBZ5 544 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 RNF141Q8WVD5 230 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 ACY3Q96HD9 319 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 UBE2E2Q96LR5 201 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 GGTLC1Q9BX51 225 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 UBQLN2Q9UHD9 624 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 RNF24Q9Y225 148 aa7.92□□□□□ -1.14
USP39-215ENST00000481409 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.91□□□□□ -1.14
USP39-215ENST00000481409 CLPSL1A2RUU4 121 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 TSPAN15O95858 294 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 PRH1P02810 166 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 IGLC1P0CG04 106 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 SULT1A2P50226 295 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 PLP1P60201 277 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 RELQ04864 619 aaPredicted RBP7.91□□□□□ -1.14
USP39-215ENST00000481409 ACOT6Q3I5F7 207 aaPredicted RBP7.91□□□□□ -1.14
USP39-215ENST00000481409 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 ZNF343Q6P1L6 599 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 CYP2G1PQ6ZSU1 146 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 KLHDC1Q8N7A1 406 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 BPIFCQ8NFQ6 507 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 LINC01006Q8NI28 216 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 WIPF2Q8TF74 440 aaPredicted RBP7.91□□□□□ -1.14
USP39-215ENST00000481409 SAT2Q96F10 170 aaPredicted RBP7.91□□□□□ -1.14
USP39-215ENST00000481409 RNF2Q99496 336 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 MGST2Q99735 147 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 SLC25A32Q9H2D1 315 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 LINC00527Q9UJ94 153 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 SLC45A2Q9UMX9 530 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 F8P00451 2351 aa7.91□□□□□ -1.14
USP39-215ENST00000481409 IGKV1OR2-108A0A075B7D4 117 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 ELOA3CA0A087WX78 387 aaPredicted RBP7.9□□□□□ -1.14
USP39-215ENST00000481409 TOMM40O96008 361 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 M6PRP20645 277 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 CDX1P47902 265 aaPredicted RBP7.9□□□□□ -1.14
USP39-215ENST00000481409 B2MP61769 119 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PRR20EP86478 221 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PRR20CP86479 221 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PRR20DP86480 221 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PRR20BP86481 221 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PRR20AP86496 221 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 FOXL1Q12952 345 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 MLANAQ16655 118 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 Q56UQ5 140 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 OR1L4Q8NGR5 311 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 Q8WTZ3 238 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 MS4A10Q96PG2 267 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 PFDN5Q99471 154 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 SLC39A9Q9NUM3 307 aa7.9□□□□□ -1.14
USP39-215ENST00000481409 IGKV1D-37A0A075B6S9 117 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 MFSD2BA6NFX1 497 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 F8W735 103 aaPredicted RBP7.89□□□□□ -1.15
USP39-215ENST00000481409 TEX46H3BTG2 121 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 TGOLN2O43493 480 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 OR2C1O95371 312 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 RD3LP0DJH9 198 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 RAB14P61106 215 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 BLOC1S1P78537 153 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 RUNX1Q01196 453 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 IFITM2Q01629 132 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 ZNF616Q08AN1 781 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 TMEM95Q3KNT9 176 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 TMEM41BQ5BJD5 291 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 ZNF600Q6ZNG1 722 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 C19orf35Q6ZS72 473 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 ZNF329Q86UD4 541 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 STPG3Q8N7X2 389 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 ZNF491Q8N8L2 437 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 OR5AU1Q8NGC0 362 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 OR51G1Q8NGK1 321 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 GATAD1Q8WUU5 269 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 TMED6Q8WW62 240 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 RSG1Q9BU20 258 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 PFDN2Q9UHV9 154 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 RNF114Q9Y508 228 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 PXMP4Q9Y6I8 212 aa7.89□□□□□ -1.15
USP39-215ENST00000481409 NSD1Q96L73 2696 aaPredicted RBP7.89□□□□□ -1.15
USP39-215ENST00000481409 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
USP39-215ENST00000481409 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 CLEC3BP05452 202 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 CTSGP08311 255 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 PROK1P58294 105 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 KIAA0141Q14154 515 aaPredicted RBP7.88□□□□□ -1.15
USP39-215ENST00000481409 FFAR4Q5NUL3 377 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 ALKAL2Q6UX46 152 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 CCDC140Q96MF4 163 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 MRPL32Q9BYC8 188 aaKnown RBP7.88□□□□□ -1.15
USP39-215ENST00000481409 KLK15Q9H2R5 256 aa7.88□□□□□ -1.15
USP39-215ENST00000481409 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
USP39-215ENST00000481409 PEF1Q9UBV8 284 aaKnown RBP7.88□□□□□ -1.15
USP39-215ENST00000481409 FN1P02751 2386 aaKnown RBP7.88□□□□□ -1.15
USP39-215ENST00000481409 SETXQ7Z333 2677 aaKnown RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 IGHV3-21A0A0B4J1V1 117 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 BMPR1BO00238 502 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 NDUFA4O00483 81 aa7.87□□□□□ -1.15
USP39-215ENST00000481409 GGCTO75223 188 aaKnown RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 LGALS1P09382 135 aaKnown RBP7.87□□□□□ -1.15
USP39-215ENST00000481409 LINC00869P0C866 280 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms