RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 MSMPQ1L6U9 139 aa15.55■□□□□ 0.08
CCM2-214ENST00000481194 ZGRF1Q86YA3 2104 aa15.55■□□□□ 0.08
CCM2-214ENST00000481194 A0A1B0GW64 132 aa15.55■□□□□ 0.08
CCM2-214ENST00000481194 CR1LQ2VPA4 569 aa15.55■□□□□ 0.08
CCM2-214ENST00000481194 A0A1W2PPI3 338 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 TOMM40O96008 361 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 CENPWQ5EE01 88 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 C19orf35Q6ZS72 473 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 PUSL1Q8N0Z8 303 aaKnown RBP15.54■□□□□ 0.08
CCM2-214ENST00000481194 NPIPB5A8MRT5 1133 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 J3KRW8 73 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 IGKV1-39P01597 117 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 IGKV1D-39P04432 117 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 ZNRD1Q9P1U0 126 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 SPANXN1Q5VSR9 72 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 DIDO1Q9BTC0 2240 aaKnown RBP15.54■□□□□ 0.08
CCM2-214ENST00000481194 CMC4P56277 68 aaPredicted RBP15.54■□□□□ 0.08
CCM2-214ENST00000481194 CBLN2Q8IUK8 224 aa15.54■□□□□ 0.08
CCM2-214ENST00000481194 A8MXK9 166 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 PRSS3P2Q8NHM4 247 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 GTF3C1Q12789 2109 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 STAG3L2P0CL84 134 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 STAG3L3P0CL85 134 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 APCSP02743 223 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 GPX1P07203 203 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 SNRPCP09234 159 aaKnown RBP15.53■□□□□ 0.08
CCM2-214ENST00000481194 NUTF2P61970 127 aaKnown RBP15.53■□□□□ 0.08
CCM2-214ENST00000481194 LRRC75A-AS1Q8N1F1 130 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 AGMATQ9BSE5 352 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 ARL2-SNX15V9GYD0 113 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 NDUFS7O75251 213 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 C12orf57Q99622 126 aa15.53■□□□□ 0.08
CCM2-214ENST00000481194 MRPL54Q6P161 138 aaKnown RBP15.52■□□□□ 0.08
CCM2-214ENST00000481194 SFRP2Q96HF1 295 aa15.52■□□□□ 0.08
CCM2-214ENST00000481194 ATG101Q9BSB4 218 aa15.52■□□□□ 0.08
CCM2-214ENST00000481194 CRISP2P16562 243 aa15.52■□□□□ 0.07
CCM2-214ENST00000481194 HIST1H1AQ02539 215 aaPredicted RBP15.52■□□□□ 0.07
CCM2-214ENST00000481194 ISOC2Q96AB3 205 aa15.52■□□□□ 0.07
CCM2-214ENST00000481194 H3BTX0 84 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 ZNF207O43670 478 aaKnown RBP15.51■□□□□ 0.07
CCM2-214ENST00000481194 ZNF843Q8N446 348 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 AURKAIP1Q9NWT8 199 aaPredicted RBP15.51■□□□□ 0.07
CCM2-214ENST00000481194 TRBV9A0A0B4J1U6 114 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 DDB2Q92466 427 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 PSG1P11464 419 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 OR4B1Q8NGF8 309 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 PAX1P15863 534 aa15.51■□□□□ 0.07
CCM2-214ENST00000481194 SNURFLB1AK76 121 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 AREGP15514 252 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 G0S2P27469 103 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 RNASEKQ6P5S7 137 aaKnown RBP15.5■□□□□ 0.07
CCM2-214ENST00000481194 IGHV4-61A0A0C4DH41 118 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 HLA-DQA1P01909 254 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 KRTDAPP60985 99 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 ICE1Q9Y2F5 2266 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 DUSP14O95147 198 aaKnown RBP15.5■□□□□ 0.07
CCM2-214ENST00000481194 IER3P46695 156 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 INTS1Q8N201 2190 aaKnown RBP15.5■□□□□ 0.07
CCM2-214ENST00000481194 A0A087X0M5 115 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 A0A1B0GX30 115 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 H3BUA1 57 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 MST1LQ2TV78 715 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 CIARTQ8N365 385 aaPredicted RBP15.5■□□□□ 0.07
CCM2-214ENST00000481194 GOLT1BQ9Y3E0 138 aa15.5■□□□□ 0.07
CCM2-214ENST00000481194 TRAV9-1A0A075B6T8 112 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 ATP5G3P48201 142 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 SCO2A0A1W2PP80 73 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 EIF3GO75821 320 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCM2-214ENST00000481194 MFAP2P55001 183 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 IGHV4-30-2A0A087WSY4 118 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 TMSB15BA0A087X1C1 80 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 GCGP01275 180 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 IQCJQ1A5X6 159 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 TMEM116Q8NCL8 245 aa15.49■□□□□ 0.07
CCM2-214ENST00000481194 SLC25A39Q9BZJ4 359 aaPredicted RBP15.49■□□□□ 0.07
CCM2-214ENST00000481194 IGHV3-66A0A0C4DH42 116 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 ATP6V0E1O15342 81 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 CCL20P78556 96 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 SIGLEC15Q6ZMC9 328 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 RTTNQ86VV8 2226 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 LEPP41159 167 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 EPDR1Q9UM22 224 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 IGHV3OR16-13A0A075B7E8 117 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 IGHV3-74A0A0B4J1X5 117 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 YPEL3P61236 119 aaPredicted RBP15.48■□□□□ 0.07
CCM2-214ENST00000481194 SOX21Q9Y651 276 aaPredicted RBP15.48■□□□□ 0.07
CCM2-214ENST00000481194 A0A087WWC5 75 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 TWIST1Q15672 202 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 Q6AWC8 147 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 ADAMTS20P59510 1910 aa15.48■□□□□ 0.07
CCM2-214ENST00000481194 CGB1A6NKQ9 187 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 OVOL1O14753 267 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 ZFP30Q9Y2G7 519 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 IGHV3-49A0A0A0MS15 119 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 CNTFRP26992 372 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 SMAGPQ0VAQ4 97 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 FAM53AQ6NSI3 398 aaPredicted RBP15.47■□□□□ 0.07
CCM2-214ENST00000481194 LINC00527Q9UJ94 153 aa15.47■□□□□ 0.07
CCM2-214ENST00000481194 OR4C46A6NHA9 309 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms