RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 DISC1C4P0D8 188 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 B3GALNT1O75752 331 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 P2RY1P47900 373 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 SPCS3P61009 180 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 RBMS2Q15434 407 aaKnown RBP11.16□□□□□ -0.62
LIMS3-203ENST00000480744 LHFPL5Q8TAF8 219 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 MFFQ9GZY8 342 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
LIMS3-203ENST00000480744 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.16□□□□□ -0.62
LIMS3-203ENST00000480744 RPS10-NUDT3A0A1W2PQS6 291 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 CDS2O95674 445 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 IFNA4P05014 189 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 HTR2BP41595 481 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 BSXQ3C1V8 233 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 FAM219AQ8IW50 185 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 TOMM5Q8N4H5 51 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 RBPMSQ93062 196 aaKnown RBP11.15□□□□□ -0.62
LIMS3-203ENST00000480744 GRAMD2BQ96HH9 432 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 C11orf68Q9H3H3 251 aaKnown RBP11.15□□□□□ -0.62
LIMS3-203ENST00000480744 MCUBQ9NWR8 336 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 GPR132Q9UNW8 380 aa11.15□□□□□ -0.62
LIMS3-203ENST00000480744 TRAV30A0A087WSZ9 112 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 K7EQG2 157 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 NXPH3O95157 252 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 IGKV1-17P01599 117 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 CRYBB3P26998 211 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 RND2P52198 227 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 DHODHQ02127 395 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 SELENOHQ8IZQ5 122 aaKnown RBP11.14□□□□□ -0.63
LIMS3-203ENST00000480744 RPP25LQ8N5L8 163 aaKnown RBP11.14□□□□□ -0.63
LIMS3-203ENST00000480744 OR52E5Q8NH55 327 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 GLYATL2Q8WU03 294 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 GPR146Q96CH1 333 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 PRRT1Q99946 306 aa11.14□□□□□ -0.63
LIMS3-203ENST00000480744 KNCNA6PVL3 124 aa11.13□□□□□ -0.63
LIMS3-203ENST00000480744 DEDDO75618 318 aa11.13□□□□□ -0.63
LIMS3-203ENST00000480744 SURF2Q15527 256 aaPredicted RBP11.13□□□□□ -0.63
LIMS3-203ENST00000480744 SLC24A4Q8NFF2 622 aa11.13□□□□□ -0.63
LIMS3-203ENST00000480744 CRYM-AS1A6NIL9 109 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 IL7P13232 177 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 OR10J1P30954 320 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 EIF2B2P49770 351 aaKnown RBP11.12□□□□□ -0.63
LIMS3-203ENST00000480744 AP3S2P59780 193 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 DHRS2Q13268 280 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 AARDQ4LEZ3 155 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 PRSS54Q6PEW0 395 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 TRPT1Q86TN4 253 aaKnown RBP11.12□□□□□ -0.63
LIMS3-203ENST00000480744 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 Q8WTZ3 238 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 SCP2D1Q9UJQ7 156 aa11.12□□□□□ -0.63
LIMS3-203ENST00000480744 HNRNPCP07910 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
LIMS3-203ENST00000480744 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 SLC25A4P12235 298 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 BTCP35070 178 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 LGALS9CQ6DKI2 356 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
LIMS3-203ENST00000480744 ACY3Q96HD9 319 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 PRR13Q9NZ81 148 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 PTTG2Q9NZH5 202 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 KMT2AQ03164 3969 aa11.11□□□□□ -0.63
LIMS3-203ENST00000480744 LINC00854A0A1B0GVQ3 168 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 HELTA6NFD8 242 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 IL4P05112 153 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 SPP1P10451 314 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 C4BPBP20851 252 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 NPY1RP25929 384 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 FAUP35544 74 aaKnown RBP11.1□□□□□ -0.63
LIMS3-203ENST00000480744 CCR6P51684 374 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
LIMS3-203ENST00000480744 PSMG4Q5JS54 123 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 TRIQKQ629K1 86 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 ETFRF1Q6IPR1 90 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 MORN3Q6PF18 240 aaPredicted RBP11.1□□□□□ -0.63
LIMS3-203ENST00000480744 C2CD4CQ8TF44 421 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 DCANP1Q8TF63 244 aa11.1□□□□□ -0.63
LIMS3-203ENST00000480744 IGHV4-28A0A0C4DH34 117 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 IFNA10P01566 189 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 GIG44P09565 113 aaPredicted RBP11.09□□□□□ -0.63
LIMS3-203ENST00000480744 SULT1A3P0DMM9 295 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 SULT1A4P0DMN0 295 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
LIMS3-203ENST00000480744 USF2Q15853 346 aaPredicted RBP11.09□□□□□ -0.63
LIMS3-203ENST00000480744 TMEM41BQ5BJD5 291 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 Q8NAQ8 132 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 TMEM170AQ8WVE7 144 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 DEDD2Q8WXF8 326 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 BATF3Q9NR55 127 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 TMEM56-RWDD3S4R434 201 aa11.09□□□□□ -0.63
LIMS3-203ENST00000480744 U3KQE9 123 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms