RNA–Protein interactions for RNA: ENST00000480548.5

SGIP1-209, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 5

Gene SGIP1, Length 801 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-209ENST00000480548 CXCL1P09341 107 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 MPC1LP0DKB6 136 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 NFYAP23511 347 aaPredicted RBP3.41□□□□□ -1.86
SGIP1-209ENST00000480548 RNASE4P34096 147 aaKnown RBP3.41□□□□□ -1.86
SGIP1-209ENST00000480548 DYNLT3P51808 116 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 TMBIM6P55061 237 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 SUPT4H1P63272 117 aaKnown RBP3.41□□□□□ -1.86
SGIP1-209ENST00000480548 RHOGP84095 191 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 EBI3Q14213 229 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 MORN2Q502X0 79 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 AMMECR1LQ6DCA0 310 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 TCTE3Q8IZS6 198 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 DYNAPQ8N1N2 210 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 SIGLECL1Q8N7X8 197 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 PFN4Q8NHR9 129 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 ZC2HC1AQ96GY0 325 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 CGREF1Q99674 301 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 HIGD2AQ9BW72 106 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 RNF11Q9Y3C5 154 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 CD109Q6YHK3 1445 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 CAMSAP2Q08AD1 1489 aa3.41□□□□□ -1.86
SGIP1-209ENST00000480548 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.86
SGIP1-209ENST00000480548 RFX7Q2KHR2 1363 aa3.4□□□□□ -1.86
SGIP1-209ENST00000480548 TRGV10A0A0A0MS01 117 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 TRAV5A0A0B4J249 113 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 MEIS3P1A6NDR6 274 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 SULT1C4O75897 302 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 CPSF4O95639 269 aaKnown RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 C1QCP02747 245 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 SCTP09683 121 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 ZNF14P17017 642 aaPredicted RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 RPL13AP3Q6NVV1 102 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 C22orf39Q6P5X5 142 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 SPATA31E1Q6ZUB1 1445 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 TMEM106AQ96A25 262 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 ADAT1Q9BUB4 502 aaKnown RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 TCEAL2Q9H3H9 227 aaPredicted RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 TRPM3Q9HCF6 1732 aaPredicted RBP3.4□□□□□ -1.87
SGIP1-209ENST00000480548 EPDR1Q9UM22 224 aa3.4□□□□□ -1.87
SGIP1-209ENST00000480548 TOPBP1Q92547 1522 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 OVOS2A0A0G2JMS6 1433 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 TRAV7A0A075B6U4 112 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 A8MU10 97 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 C5orf58C9J3I9 102 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 K7EP13 123 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 PSCAO43653 123 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 OR2H2O95918 312 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 TCL1BO95988 128 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 NAPSAO96009 420 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 SDC2P34741 201 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 NDUFA6P56556 154 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 KHDC3LQ587J8 217 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 DPPA3Q6W0C5 159 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 Q6ZS52 159 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 HMGN2P46Q86SG4 172 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 RNF182Q8N6D2 247 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 LXNQ9BS40 222 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 MRPL16Q9NX20 251 aaKnown RBP3.39□□□□□ -1.87
SGIP1-209ENST00000480548 U3KQ87 197 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 CCDC171Q6TFL3 1326 aa3.39□□□□□ -1.87
SGIP1-209ENST00000480548 MED23Q9ULK4 1368 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 PLXNB1O43157 2135 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 C3orf84H3BNL1 204 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 DPM2O94777 84 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 DEFA4P12838 97 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 HIST1H1AQ02539 215 aaPredicted RBP3.38□□□□□ -1.87
SGIP1-209ENST00000480548 VMA21Q3ZAQ7 101 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 SLC35E3Q7Z769 313 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 Q8NDZ9 215 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 HSPE1-MOB4S4R3N1 261 aa3.38□□□□□ -1.87
SGIP1-209ENST00000480548 ERCC6Q03468 1493 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 A0A1B0GW64 132 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 H7C2G1 150 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 J3QQQ9 107 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 NDUFB3O43676 98 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 FABP2P12104 132 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 ARPP19P56211 112 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 HBBP68871 147 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 PDZD9Q8IXQ8 264 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 TSTD1Q8NFU3 115 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 NPCDR1Q9BY65 106 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 SLIT3O75094 1523 aa3.37□□□□□ -1.87
SGIP1-209ENST00000480548 IGKV2-28A0A075B6P5 120 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 IGHV1-58A0A0C4DH39 117 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 A0A0D9SG52 128 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 A0A0J9YX75 114 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 IGKV2D-28P01615 120 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 FXYD2P54710 66 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 MOBPQ13875 183 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 EIF5AL1Q6IS14 154 aaKnown RBP3.36□□□□□ -1.87
SGIP1-209ENST00000480548 LINC00305Q7Z4B0 112 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 PRADC1Q9BSG0 188 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 ZNF471Q9BX82 626 aaPredicted RBP3.36□□□□□ -1.87
SGIP1-209ENST00000480548 SMIM3Q9BZL3 60 aa3.36□□□□□ -1.87
SGIP1-209ENST00000480548 MED1Q15648 1581 aaPredicted RBP3.36□□□□□ -1.87
SGIP1-209ENST00000480548 LCTP09848 1927 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms