RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 GNG7O60262 68 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 IFNA7P01567 189 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 FCGR2BP31994 310 aaPredicted RBP13.65□□□□□ -0.22
UPF3A-206ENST00000480362 CYP2G1PQ6ZSU1 146 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 COMMD1Q8N668 190 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 TRGV9Q99603 122 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 SLC45A2Q9UMX9 530 aa13.65□□□□□ -0.22
UPF3A-206ENST00000480362 TRAV30A0A087WSZ9 112 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 TCRBV4S1A1TA0A5B7 111 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 RPLP1P05386 114 aaKnown RBP13.64□□□□□ -0.23
UPF3A-206ENST00000480362 CLEC3BP05452 202 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 IGLC1P0CG04 106 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 ZNF90Q03938 601 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 KIAA0141Q14154 515 aaPredicted RBP13.64□□□□□ -0.23
UPF3A-206ENST00000480362 TIGITQ495A1 244 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 FAM74A1Q5RGS3 127 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 MIC13Q5XKP0 118 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 CLEC19AQ6UXS0 136 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 OR4F5Q8NH21 305 aa13.64□□□□□ -0.23
UPF3A-206ENST00000480362 OR2T8A6NH00 312 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 GATA2P23769 480 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-206ENST00000480362 RPL29P47914 159 aaKnown RBP13.63□□□□□ -0.23
UPF3A-206ENST00000480362 SERF2P84101 59 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 TMEM182Q6ZP80 229 aaPredicted RBP13.63□□□□□ -0.23
UPF3A-206ENST00000480362 ZNF767PQ75MW2 155 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 RNF152Q8N8N0 203 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 BPIFCQ8NFQ6 507 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 CCDC140Q96MF4 163 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 GAR1Q9NY12 217 aaKnown RBP13.63□□□□□ -0.23
UPF3A-206ENST00000480362 UBQLN2Q9UHD9 624 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
UPF3A-206ENST00000480362 IGKV1-17P01599 117 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 CTSGP08311 255 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 LINC00869P0C866 280 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 GPR183P32249 361 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 ELLP55199 621 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-206ENST00000480362 SELENOTP62341 195 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 PRR20EP86478 221 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 PRR20CP86479 221 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 PRR20DP86480 221 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 PRR20BP86481 221 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 PRR20AP86496 221 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 FFAR4Q5NUL3 377 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 STPG3Q8N7X2 389 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 ZNF491Q8N8L2 437 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 WIPF2Q8TF74 440 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-206ENST00000480362 KCNIP2Q9NS61 270 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 SLC39A9Q9NUM3 307 aa13.62□□□□□ -0.23
UPF3A-206ENST00000480362 NSD1Q96L73 2696 aaPredicted RBP13.62□□□□□ -0.23
UPF3A-206ENST00000480362 CLPSL1A2RUU4 121 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 HAX1O00165 279 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 TSPAN15O95858 294 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 SULT1A2P50226 295 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 B2MP61769 119 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 ZNF343Q6P1L6 599 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 OR4X2Q8NGF9 303 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 ATP6V0BQ99437 205 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 CHRDL1Q9BU40 450 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 RNF114Q9Y508 228 aa13.61□□□□□ -0.23
UPF3A-206ENST00000480362 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.6□□□□□ -0.23
UPF3A-206ENST00000480362 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 RGS13O14921 159 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 NUPL2O15504 423 aaKnown RBP13.6□□□□□ -0.23
UPF3A-206ENST00000480362 SCGB2A1O75556 95 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 YIF1AO95070 293 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 FABP1P07148 127 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 ADMP35318 185 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 YPEL3P61236 119 aaPredicted RBP13.6□□□□□ -0.23
UPF3A-206ENST00000480362 ZNF616Q08AN1 781 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 OR5B12Q96R08 314 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
UPF3A-206ENST00000480362 UMAD1C9J7I0 102 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 TGOLN2O43493 480 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 TOMM40O96008 361 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 RD3LP0DJH9 198 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 PSG1P11464 419 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 ACOT6Q3I5F7 207 aaPredicted RBP13.59□□□□□ -0.23
UPF3A-206ENST00000480362 TMEM41BQ5BJD5 291 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 TCTEX1D4Q5JR98 221 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 Q6ZRG5 221 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 RNF141Q8WVD5 230 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 UBE2E2Q96LR5 201 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 GNB4Q9HAV0 340 aa13.59□□□□□ -0.23
UPF3A-206ENST00000480362 CUBNO60494 3623 aa13.58□□□□□ -0.23
UPF3A-206ENST00000480362 PPP5D1E7EU14 171 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 TRBV12-3P01733 135 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 MBP02144 154 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 ARL3P36405 182 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 RAB5CP51148 216 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 PROK1P58294 105 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 RAB2AP61019 212 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 SPSB3Q6PJ21 355 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.58□□□□□ -0.24
UPF3A-206ENST00000480362 Q8WTZ3 238 aa13.58□□□□□ -0.24
UPF3A-206ENST00000480362 RPRMQ9NS64 109 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms