RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TMED4Q7Z7H5 227 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 SLC24A4Q8NFF2 622 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 OR4D10Q8NGI6 311 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 OR1S2Q8NGQ3 325 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 COQ8AQ8NI60 647 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 C2CD4CQ8TF44 421 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 SLC35E1Q96K37 410 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 NAA50Q9GZZ1 169 aaKnown RBP5.22□□□□□ -1.57
COL17A1-205ENST00000480127 TMEM222Q9H0R3 208 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 NAA60Q9H7X0 242 aa5.22□□□□□ -1.57
COL17A1-205ENST00000480127 ZFP92A6NM28 416 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 KNCNA6PVL3 124 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 TMEM50AO95807 157 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 APOHP02749 345 aaPredicted RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 HNRNPCP07910 306 aaKnown RBP eCLIP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RD3LP0DJH9 198 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RNASE2P10153 161 aaKnown RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 SPP1P10451 314 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 ATF4P18848 351 aaPredicted RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 VAMP1P23763 118 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 ID1P41134 155 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 AP3S2P59780 193 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 SRPXP78539 464 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PRR20EP86478 221 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PRR20CP86479 221 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PRR20DP86480 221 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PRR20BP86481 221 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PRR20AP86496 221 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 SSBP1Q04837 148 aaKnown RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 SURF2Q15527 256 aaPredicted RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 PYDC2Q56P42 97 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 TMEM41BQ5BJD5 291 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 MORN3Q6PF18 240 aaPredicted RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 OR51S1Q8NGJ8 323 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 OR4X1Q8NH49 305 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RNASEH2CQ8TDP1 164 aaKnown RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 LINC00052Q96N35 136 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 ABHD1Q96SE0 405 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 C1QTNF4Q9BXJ3 329 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RABL2AQ9UBK7 228 aaPredicted RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RSL24D1Q9UHA3 163 aaKnown RBP5.21□□□□□ -1.58
COL17A1-205ENST00000480127 RABL2BQ9UNT1 228 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 HECTD4Q9Y4D8 3996 aa5.21□□□□□ -1.58
COL17A1-205ENST00000480127 IGHV3OR16-12A0A075B7B8 117 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 TRAV2A0A0B4J234 112 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 A0A1B0GU03 582 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 IGKV3-20P01619 116 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 UCP1P25874 307 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 S100A7P31151 101 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 S100A5P33763 92 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 RPL5P46777 297 aaKnown RBP5.2□□□□□ -1.58
COL17A1-205ENST00000480127 EMP1P54849 157 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 LYZP61626 148 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 RAB11AP62491 216 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 RPP30P78346 268 aaKnown RBP5.2□□□□□ -1.58
COL17A1-205ENST00000480127 KLF9Q13886 244 aaPredicted RBP5.2□□□□□ -1.58
COL17A1-205ENST00000480127 SMCO1Q147U7 214 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 CTF1Q16619 201 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 LGI3Q8N145 548 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 OR4C16Q8NGL9 310 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 DTD1Q8TEA8 209 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 RAB2BQ8WUD1 216 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 SMIM4Q8WVI0 70 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 NPIPB3Q92617 1050 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 ZNF414Q96IQ9 312 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 C7orf50Q9BRJ6 194 aaKnown RBP5.2□□□□□ -1.58
COL17A1-205ENST00000480127 C11orf68Q9H3H3 251 aaKnown RBP5.2□□□□□ -1.58
COL17A1-205ENST00000480127 VSIRQ9H7M9 311 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 CLEC5AQ9NY25 188 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 TBC1D24Q9ULP9 559 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 RYR1P21817 5038 aa5.2□□□□□ -1.58
COL17A1-205ENST00000480127 A0A0G2JRQ6 117 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 SMCO3A2RU48 225 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 FABP12A6NFH5 140 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CRYM-AS1A6NIL9 109 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 C11orf94C9JXX5 98 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 WRBO00258 174 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CTDSP2O14595 271 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CDS2O95674 445 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CD74P04233 296 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 MIFP14174 115 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CRYBB3P26998 211 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 CCR6P51684 374 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 MLANAQ16655 118 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 C2orf83Q53S99 150 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 SIGLEC15Q6ZMC9 328 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 LHFPL1Q86WI0 220 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 SELENOHQ8IZQ5 122 aaKnown RBP5.19□□□□□ -1.58
COL17A1-205ENST00000480127 OR4B1Q8NGF8 309 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 OR52E5Q8NH55 327 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 GPR146Q96CH1 333 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 TMEM208Q9BTX3 173 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 ZFAND3Q9H8U3 227 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 NRN1Q9NPD7 142 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 PPP1R14DQ9NXH3 145 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 U3KQ87 197 aa5.19□□□□□ -1.58
COL17A1-205ENST00000480127 TRAV10A0A0B4J240 114 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 IGHV4-28A0A0C4DH34 117 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 INS-IGF2F8WCM5 200 aa5.18□□□□□ -1.58
COL17A1-205ENST00000480127 MED6O75586 246 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms