RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CLEC3BP05452 202 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 CTSGP08311 255 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SULT1A3P0DMM9 295 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SULT1A4P0DMN0 295 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SNCAP37840 140 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 MFAP4P55083 255 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 CMC4P56277 68 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-213ENST00000480102 RAB25P57735 213 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 TNFRSF9Q07011 255 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 TRIM16LQ309B1 348 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 DEFB136Q30KP8 78 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SCGB2B2Q4G0G5 96 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 PYDC2Q56P42 97 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 OR2B11Q5JQS5 317 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SELENOHQ8IZQ5 122 aaKnown RBP3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SLC35G3Q8N808 338 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 MRAPQ8TCY5 172 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SCARB1Q8WTV0 552 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SPAG8Q99932 426 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-213ENST00000480102 PTTG2Q9NZH5 202 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 SMAD5-AS1Q9Y6J3 95 aa3.7□□□□□ -1.82
PTCD3-213ENST00000480102 C2orf70A6NJV1 201 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 TSPAN4O14817 238 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 ST8SIA3O43173 380 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 MED6O75586 246 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 OR2C1O95371 312 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 SFT2D2O95562 160 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 IFNA17P01571 189 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 TRBV12-3P01733 135 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 IGHV3-11P01762 117 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 RNASE2P10153 161 aaKnown RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 GP9P14770 177 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 CBLN1P23435 193 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 ARL3P36405 182 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 GPX4P36969 197 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 NUP62P37198 522 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 MFAP2P55001 183 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 SYNJ2BPP57105 145 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 TAS2R30P59541 319 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 YPEL3P61236 119 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 RPP30P78346 268 aaKnown RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 SMCO1Q147U7 214 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 DEFB114Q30KQ6 69 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 TRIQKQ629K1 86 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 FAM90A2PQ658T7 463 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 LAMTOR1Q6IAA8 161 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 PLET1Q6UQ28 207 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 ADAMTSL5Q6ZMM2 481 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 LINC00322Q6ZN03 302 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 CENPSQ8N2Z9 138 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 DUSP18Q8NEJ0 188 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 SLC24A4Q8NFF2 622 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 OR10W1Q8NGF6 305 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 LHFPL5Q8TAF8 219 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 SDHCQ99643 169 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-213ENST00000480102 GINS3Q9BRX5 216 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 HIPK2Q9H2X6 1198 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 MCUBQ9NWR8 336 aa3.69□□□□□ -1.82
PTCD3-213ENST00000480102 TENM3Q9P273 2699 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 STAB2Q8WWQ8 2551 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 KIR2DL5BA0A0G2JN68 375 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 KIR2DL5BA0A0G2JPC4 375 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 A0A0G2JRQ6 117 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 WI2-2373I1.2A0A1W2PRP0 233 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 A0A1W2PS18 150 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 K7EPK0 472 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 CLN5O75503 358 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 DFFBO76075 338 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 SCGB1D1O95968 90 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 MT-CO2P00403 227 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 FABP1P07148 127 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 IL7P13232 177 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 FOLR2P14207 255 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 AKR1C4P17516 323 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 S100A7P31151 101 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 BTCP35070 178 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 AP2S1P53680 142 aaPredicted RBP3.68□□□□□ -1.82
PTCD3-213ENST00000480102 ASAH1Q13510 395 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 BAK1Q16611 211 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 SAMD13Q5VXD3 122 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM268Q5VZI3 342 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 OR8G2PQ6IF36 304 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 SLC25A24Q6NUK1 477 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 CLEC19AQ6UXS0 136 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 ZNF600Q6ZNG1 722 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 SLC16A13Q7RTY0 426 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 GTSCR1Q86UQ5 136 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 KIR2DL5AQ8N109 375 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 KIR2DL5BQ8NHK3 375 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 COQ8AQ8NI60 647 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 MITD1Q8WV92 249 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 GPR146Q96CH1 333 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 RBMXL1Q96E39 390 aaKnown RBP3.68□□□□□ -1.82
PTCD3-213ENST00000480102 DUX3Q96PT4 197 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 OR5B12Q96R08 314 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 TM2D3Q9BRN9 247 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 GGACTQ9BVM4 153 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 TMEM231Q9H6L2 316 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 VSIRQ9H7M9 311 aa3.68□□□□□ -1.82
PTCD3-213ENST00000480102 ENY2Q9NPA8 101 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms