RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 Q96MF0 132 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 ATP6V0BQ99437 205 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 HSPB9Q9BQS6 159 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 FAM103A1Q9BTL3 118 aaKnown RBP8.68□□□□□ -1.02
VTI1A-204ENST00000480057 ZNF580Q9UK33 172 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
VTI1A-204ENST00000480057 SPG11Q96JI7 2443 aa8.68□□□□□ -1.02
VTI1A-204ENST00000480057 F6UZH7 168 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 H3BUX3 64 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 ATP6V0E1O15342 81 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
VTI1A-204ENST00000480057 PLXNB1O43157 2135 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 PDE6DO43924 150 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 COX7A2P2O60397 106 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 ZNF90Q03938 601 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 C10orf113Q5VZT2 155 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■□□□□ 8.2
VTI1A-204ENST00000480057 C19orf35Q6ZS72 473 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 MED13LQ71F56 2210 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 CYB561D1Q8N8Q1 229 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 STXBP6Q8NFX7 210 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 CHD6Q8TD26 2715 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 TMEM37Q8WXS4 190 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 FOXC2Q99958 501 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
VTI1A-204ENST00000480057 GAR1Q9NY12 217 aaKnown RBP8.67□□□□□ -1.02
VTI1A-204ENST00000480057 PAGE4O60829 102 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 TOMM40O96008 361 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 AMY1AP04745 511 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 IGF1P05019 195 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 GATA2P23769 480 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-204ENST00000480057 CD81P60033 236 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-204ENST00000480057 PNRC1Q12796 327 aaPredicted RBP8.66□□□□□ -1.02
VTI1A-204ENST00000480057 RHEBQ15382 184 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 C19orf54Q5BKX5 351 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 SPATA31B1PQ5VZV4 182 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 FAM90A2PQ658T7 463 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 UNQ5815/PRO19632Q6UWF5 114 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 S100A7AQ86SG5 101 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 OR5R1Q8NH85 324 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 PRRC2AP48634 2157 aaKnown RBP8.66□□□□□ -1.02
VTI1A-204ENST00000480057 CR1P17927 2039 aa8.66□□□□□ -1.02
VTI1A-204ENST00000480057 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
VTI1A-204ENST00000480057 FBN2P35556 2912 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 TRBV9A0A0B4J1U6 114 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 C11orf94C9JXX5 98 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 H3BUA1 57 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 HYPMO75409 117 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 SCO1O75880 301 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 IGHV3-48P01763 117 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 IGHG2P01859 326 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 ATRAIDQ6UW56 229 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 FAM167A-AS1Q96KT0 104 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 TMUB1Q9BVT8 246 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 PRDM13Q9H4Q3 707 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 C21orf62Q9NYP8 219 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 RNF24Q9Y225 148 aa8.65□□□□□ -1.02
VTI1A-204ENST00000480057 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 B4DEV8 164 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 H3BQ15 152 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 GNG7O60262 68 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
VTI1A-204ENST00000480057 IGKV1-17P01599 117 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 RD3LP0DJH9 198 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 PSG1P11464 419 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 PATE2Q6UY27 113 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 TMEM219Q86XT9 240 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 NECAP1Q8NC96 275 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 OR5T1Q8NG75 326 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 OR51G1Q8NGK1 321 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 OR4F5Q8NH21 305 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 TVP23CQ96ET8 276 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 OR4F4Q96R69 305 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 SLC25A2Q9BXI2 301 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 ZNF355PQ9NSJ1 428 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 FBXL7Q9UJT9 491 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 PTPN13Q12923 2485 aa8.64□□□□□ -1.03
VTI1A-204ENST00000480057 IGHV3-21A0A0B4J1V1 117 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 A0A1W2PRE2 83 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 WI2-2373I1.2A0A1W2PRP0 233 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 FAM223BA6NKX1 122 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 FAM74A7A6NL05 159 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 DNASE2O00115 360 aaPredicted RBP8.63□□□□□ -1.03
VTI1A-204ENST00000480057 OR7C2O60412 319 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 OR2J3O76001 311 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 NDUFB8O95169 186 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 OR2C1O95371 312 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 S100A7P31151 101 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 IER3P46695 156 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 ECSCRQ19T08 205 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 DEFB112Q30KQ8 113 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 TIGITQ495A1 244 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 AWAT1Q58HT5 328 aa8.63□□□□□ -1.03
VTI1A-204ENST00000480057 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms