RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 USF2Q15853 346 aaPredicted RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 FAM219AQ8IW50 185 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 RAB2BQ8WUD1 216 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 NPIPB3Q92617 1050 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 SLIRPQ9GZT3 109 aaKnown RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 CTDSPLO15194 276 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 NPY1RP25929 384 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 TNFSF8P32971 234 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 RPL5P46777 297 aaKnown RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 CMC4P56277 68 aaPredicted RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 SUPT4H1P63272 117 aaKnown RBP12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 AARDQ4LEZ3 155 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 C2orf83Q53S99 150 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 OR52E5Q8NH55 327 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 PRRT1Q99946 306 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 RBKSQ9H477 322 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 TMEM231Q9H6L2 316 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
ECHDC1-216ENST00000479525 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 IL4P05112 153 aa12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 GIG44P09565 113 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 SULT1A3P0DMM9 295 aa12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 SULT1A4P0DMN0 295 aa12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 SURF2Q15527 256 aaPredicted RBP12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 ACTL10Q5JWF8 245 aa12.68□□□□□ -0.38
ECHDC1-216ENST00000479525 A0A1W2PS18 150 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 B3GALNT1O75752 331 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 IFNA10P01566 189 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 DEFB1P60022 68 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 DHRS2Q13268 280 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 OR1S2Q8NGQ3 325 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 MCFD2Q8NI22 146 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 DCANP1Q8TF63 244 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 GATAD1Q8WUU5 269 aa12.67□□□□□ -0.38
ECHDC1-216ENST00000479525 FABP12A6NFH5 140 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 GSTZ1O43708 216 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.383e-6■□□□□ 11
ECHDC1-216ENST00000479525 TMBIM6P55061 237 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 PSMG4Q5JS54 123 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 C16orf54Q6UWD8 224 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 TMEM217Q8N7C4 229 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 Q8WTZ3 238 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 GLMPQ8WWB7 406 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 SCP2D1Q9UJQ7 156 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 KLK5Q9Y337 293 aaPredicted RBP12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 U3KQE9 123 aa12.66□□□□□ -0.38
ECHDC1-216ENST00000479525 NOL3O60936 208 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 CD5P06127 495 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 IAPPP10997 89 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 NMSQ5H8A3 153 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 OR51G1Q8NGK1 321 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 DTD1Q8TEA8 209 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 NARS2Q96I59 477 aaKnown RBP12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 SOSTQ9BQB4 213 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 PBDC1Q9BVG4 233 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 KCNIP3Q9Y2W7 256 aa12.65□□□□□ -0.38
ECHDC1-216ENST00000479525 DNAH10Q8IVF4 4471 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 VPS13DQ5THJ4 4388 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 TRAV30A0A087WSZ9 112 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 PSG1P11464 419 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 SLC25A4P12235 298 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 SMCO1Q147U7 214 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 RBMY1FQ15415 496 aaKnown RBP12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 Q8NAQ8 132 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 RNASEH2CQ8TDP1 164 aaKnown RBP12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 PAIP2BQ9ULR5 123 aaKnown RBP12.64□□□□□ -0.39
ECHDC1-216ENST00000479525 SCGB2A1O75556 95 aa12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 ZNF90Q03938 601 aa12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 KLF9Q13886 244 aaPredicted RBP12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 LGI3Q8N145 548 aa12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 GRAMD2BQ96HH9 432 aa12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 C11orf68Q9H3H3 251 aaKnown RBP12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 HSPB7Q9UBY9 170 aa12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 RSL24D1Q9UHA3 163 aaKnown RBP12.63□□□□□ -0.39
ECHDC1-216ENST00000479525 HELTA6NFD8 242 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 CCDC160A6NGH7 325 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 TOMM40O96008 361 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 IFNA4P05014 189 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 RD3LP0DJH9 198 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 CCR6P51684 374 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 FXYD7P58549 80 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 YPEL3P61236 119 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 OR2F1Q13607 317 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 TRIM63Q969Q1 353 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 RAB40CQ96S21 281 aa12.62□□□□□ -0.39
ECHDC1-216ENST00000479525 A0A0B4J2A0 478 aa12.61□□□□□ -0.39
ECHDC1-216ENST00000479525 IGKV3-20P01619 116 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms