RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 MEGF9Q9H1U4 602 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 DSCAML1Q8TD84 2053 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 COL6A6A6NMZ7 2263 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 NPY1RP25929 384 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 PSG9Q00887 426 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 GCM1Q9NP62 436 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 TCF19Q9Y242 345 aa11.5□□□□□ -0.57
CCDC78-210ENST00000478979 ASH1LQ9NR48 2969 aaKnown RBP11.5□□□□□ -0.57
CCDC78-210ENST00000478979 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 GATA2P23769 480 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 STPG3Q8N7X2 389 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 SMIM12Q96EX1 92 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 C1orf159Q96HA4 380 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 JPT1Q9UK76 154 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 ZZEF1O43149 2961 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 OR4C46A6NHA9 309 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 ISLRO14498 428 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 AREGP15514 252 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 RPL8P62917 257 aaKnown RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 SSBP3Q9BWW4 388 aaPredicted RBP11.49□□□□□ -0.57
CCDC78-210ENST00000478979 IZUMO1RA6ND01 250 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 PRSS46E5RG02 174 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 SAP30O75446 220 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 IGHV1-46P01743 117 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 IGKV1-16P04430 117 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 C17orf58Q2M2W7 97 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 TIMM23BQ5SRD1 257 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 ARL2-SNX15V9GYD0 113 aa11.49□□□□□ -0.57
CCDC78-210ENST00000478979 hDV102S1A0JD36 115 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 IGHV3-48P01763 117 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 GLRXP35754 106 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 PSG5Q15238 335 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 C1orf185Q5T7R7 199 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 MIR17HGQ75NE6 70 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 FAM168AQ92567 244 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 ZC2HC1AQ96GY0 325 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 IL19Q9UHD0 177 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 CIDEAO60543 219 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 GFRA3O60609 400 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 IGLV2-8P01709 118 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 GPR6P46095 362 aaPredicted RBP11.48□□□□□ -0.57
CCDC78-210ENST00000478979 MZT1Q08AG7 82 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 MLANAQ16655 118 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 NHLRC2Q8NBF2 726 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 TMEM70Q9BUB7 260 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 RNF7Q9UBF6 113 aa11.48□□□□□ -0.57
CCDC78-210ENST00000478979 TRAV8-6A0A0B4J262 113 aa11.47□□□□□ -0.57
CCDC78-210ENST00000478979 GDF5OSQ5U4N7 250 aa11.47□□□□□ -0.57
CCDC78-210ENST00000478979 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
CCDC78-210ENST00000478979 ST20Q9HBF5 79 aa11.47□□□□□ -0.57
CCDC78-210ENST00000478979 LSM4Q9Y4Z0 139 aaKnown RBP11.47□□□□□ -0.57
CCDC78-210ENST00000478979 AKAP6Q13023 2319 aa11.47□□□□□ -0.57
CCDC78-210ENST00000478979 SH2D7A6NKC9 451 aaPredicted RBP11.47□□□□□ -0.57
CCDC78-210ENST00000478979 CCL3L1P16619 93 aa11.47□□□□□ -0.57
CCDC78-210ENST00000478979 H1FXQ92522 213 aaKnown RBP11.47□□□□□ -0.57
CCDC78-210ENST00000478979 MFAP2P55001 183 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 DLX1P56177 255 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 PRR31Q5SQ13 230 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 FAM71F2Q6NXP2 309 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 SLC25A34Q6PIV7 304 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 OR2T6Q8NHC8 308 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 SSBP4Q9BWG4 385 aaPredicted RBP11.46□□□□□ -0.57
CCDC78-210ENST00000478979 SAP30LQ9HAJ7 183 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 NPVFQ9HCQ7 196 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 ENY2Q9NPA8 101 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 OR4S2Q8NH73 311 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 FAM216AQ8WUB2 273 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 CCL17Q92583 94 aa11.46□□□□□ -0.57
CCDC78-210ENST00000478979 SPTBN1Q01082 2364 aaKnown RBP11.46□□□□□ -0.58
CCDC78-210ENST00000478979 KBTBD11-OT1A0A1B0GTJ5 212 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 HSBP1L1C9JCN9 74 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 CORTO00230 105 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 CD40P25942 277 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 TMPRSS3P57727 454 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.58
CCDC78-210ENST00000478979 PTPRQQ9UMZ3 2332 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 IGFBP2P18065 325 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 VDAC2P45880 294 aaPredicted RBP11.45□□□□□ -0.58
CCDC78-210ENST00000478979 KLF5Q13887 457 aaPredicted RBP11.45□□□□□ -0.58
CCDC78-210ENST00000478979 TEPPQ6URK8 271 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 OR10W1Q8NGF6 305 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
CCDC78-210ENST00000478979 APELAP0DMC3 54 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 LINC00173Q6ZV60 143 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 OR52E5Q8NH55 327 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 SRRM4A7MD48 611 aaKnown RBP11.44□□□□□ -0.58
CCDC78-210ENST00000478979 F2RL2O00254 374 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 CD5LO43866 347 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 LHBP01229 141 aa11.44□□□□□ -0.58
CCDC78-210ENST00000478979 WIPF2Q8TF74 440 aaPredicted RBP11.44□□□□□ -0.58
CCDC78-210ENST00000478979 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms