RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 DTD1Q8TEA8 209 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 IGKV3-7A0A075B6H7 116 aa13.86□□□□□ -0.19
SREBF1-212ENST00000478616 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-212ENST00000478616 NDUFB6O95139 128 aa13.86□□□□□ -0.19
SREBF1-212ENST00000478616 CRYBB3P26998 211 aa13.86□□□□□ -0.19
SREBF1-212ENST00000478616 RBMS2Q15434 407 aaKnown RBP13.86□□□□□ -0.19
SREBF1-212ENST00000478616 TCF24Q7RTU0 167 aa13.86□□□□□ -0.19
SREBF1-212ENST00000478616 IGKV1D-37A0A075B6S9 117 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 DUXBA0A1W2PPF3 345 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 MPTX1A8MV57 137 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 PLA2G10O15496 165 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 ANXA3P12429 323 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 IL7P13232 177 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 VAMP1P23763 118 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 TFPI2P48307 235 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 SRPXP78539 464 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 ZFAND6Q6FIF0 208 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 CENPSQ8N2Z9 138 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 GBGT1Q8N5D6 347 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 MAP6D1Q9H9H5 199 aa13.85□□□□□ -0.19
SREBF1-212ENST00000478616 LINC00854A0A1B0GVQ3 168 aa13.84□□□□□ -0.19
SREBF1-212ENST00000478616 OR4C46A6NHA9 309 aa13.84□□□□□ -0.19
SREBF1-212ENST00000478616 USF2Q15853 346 aaPredicted RBP13.84□□□□□ -0.19
SREBF1-212ENST00000478616 NPIPB3Q92617 1050 aa13.84□□□□□ -0.19
SREBF1-212ENST00000478616 GINS3Q9BRX5 216 aa13.84□□□□□ -0.19
SREBF1-212ENST00000478616 HYDINQ4G0P3 5121 aa13.83□□□□□ -0.19
SREBF1-212ENST00000478616 C9orf170A2RU37 121 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 PRSS46E5RG02 174 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 ADAP1O75689 374 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 SLC25A4P12235 298 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 SLC25A6P12236 298 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 OR10J1P30954 320 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 YPEL3P61236 119 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-212ENST00000478616 EWSR1Q01844 656 aaKnown RBP eCLIP13.83□□□□□ -0.2
SREBF1-212ENST00000478616 GGNBP1Q5YKI7 109 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 OR1S2Q8NGQ3 325 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 OR1S1Q8NH92 325 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 MS4A6AQ9H2W1 248 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 U3KQ87 197 aa13.83□□□□□ -0.2
SREBF1-212ENST00000478616 ALMS1Q8TCU4 4167 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 RPS10-NUDT3A0A1W2PQS6 291 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 IFNA10P01566 189 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 HOXB5P09067 269 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 IAPPP10997 89 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 STPG3Q8N7X2 389 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 S100ZQ8WXG8 99 aa13.82□□□□□ -0.2
SREBF1-212ENST00000478616 IGKV1OR2-108A0A075B7D4 117 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 TRAV30A0A087WSZ9 112 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 NAP1L6A6NFF2 107 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 LYL1P12980 280 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
SREBF1-212ENST00000478616 ANXA7P20073 488 aaKnown RBP13.81□□□□□ -0.2
SREBF1-212ENST00000478616 UBE2MP61081 183 aaKnown RBP13.81□□□□□ -0.2
SREBF1-212ENST00000478616 DHRS2Q13268 280 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 GAMTQ14353 236 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 TRIQKQ629K1 86 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 GLMPQ8WWB7 406 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 ACY3Q96HD9 319 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 MAGT1Q9H0U3 335 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 TMED3Q9Y3Q3 217 aa13.81□□□□□ -0.2
SREBF1-212ENST00000478616 K7EQG2 157 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 PSG1P11464 419 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 NPPCP23582 126 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 P2RY1P47900 373 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 WFDC3Q8IUB2 231 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 DCANP1Q8TF63 244 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 CACFD1Q9UGQ2 172 aa13.8□□□□□ -0.2
SREBF1-212ENST00000478616 TRAV2A0A0B4J234 112 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 FAM90A26D6RGX4 464 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 TOMM40O96008 361 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 OR4E1P0C645 316 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 ZNF90Q03938 601 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 DEFB135Q30KP9 77 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 C16orf54Q6UWD8 224 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 METTL26Q96S19 204 aa13.79□□□□□ -0.2
SREBF1-212ENST00000478616 KIR2DL5BA0A0G2JN68 375 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 KIR2DL5BA0A0G2JPC4 375 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 GPX4P36969 197 aaPredicted RBP13.78□□□□□ -0.2
SREBF1-212ENST00000478616 ID3Q02535 119 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 Q6ZWC4 215 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 KIR2DL5AQ8N109 375 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 OR4D5Q8NGN0 318 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 KIR2DL5BQ8NHK3 375 aa13.78□□□□□ -0.2
SREBF1-212ENST00000478616 WDR12Q9GZL7 423 aaKnown RBP13.78□□□□□ -0.2
SREBF1-212ENST00000478616 PMS2P5A8MQ11 134 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 SYNGR2O43760 224 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 IL4P05112 153 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 GIG44P09565 113 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-212ENST00000478616 ATP5IP56385 69 aaPredicted RBP13.77□□□□□ -0.21
SREBF1-212ENST00000478616 DEFB131AP59861 70 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 ZNF846Q147U1 533 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 LEMD1Q68G75 181 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 ETFRF1Q6IPR1 90 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 NOXA1Q86UR1 476 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 Q8WTZ3 238 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 RNF183Q96D59 192 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 C7orf50Q9BRJ6 194 aaKnown RBP13.77□□□□□ -0.21
SREBF1-212ENST00000478616 CCDC32Q9BV29 185 aa13.77□□□□□ -0.21
SREBF1-212ENST00000478616 TP53TG1Q9Y2A0 90 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms