RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ADAMTSL5Q6ZMM2 481 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 SLC16A13Q7RTY0 426 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 NOXA1Q86UR1 476 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 ZBTB8BQ8NAP8 495 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 OR4D5Q8NGN0 318 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 RNASEH2CQ8TDP1 164 aaKnown RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 TMEM190Q8WZ59 177 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 ACY3Q96HD9 319 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 CIB3Q96Q77 187 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 ATP6V0BQ99437 205 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 TXN2Q99757 166 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF436Q9C0F3 470 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 GPN1Q9HCN4 374 aaPredicted RBP5.24□□□□□ -1.57
BRCA1-215ENST00000478531 UFC1Q9Y3C8 167 aa5.24□□□□□ -1.57
BRCA1-215ENST00000478531 IZUMO1RA6ND01 250 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 C15orf62A8K5M9 175 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 NDUFA4O00483 81 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 CLN5O75503 358 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 SCGB2A1O75556 95 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 GP9P14770 177 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 FCGR2BP31994 310 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-215ENST00000478531 RAB11AP62491 216 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 RPP30P78346 268 aaKnown RBP5.23□□□□□ -1.57
BRCA1-215ENST00000478531 TIGITQ495A1 244 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 CD300EQ496F6 205 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-215ENST00000478531 ETFRF1Q6IPR1 90 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 LCN12Q6JVE5 192 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 PRSS54Q6PEW0 395 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 BTNL8Q6UX41 500 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 OR4X1Q8NH49 305 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 DAZ1Q9NQZ3 744 aaKnown RBP5.23□□□□□ -1.57
BRCA1-215ENST00000478531 DNAH9Q9NYC9 4486 aa5.23□□□□□ -1.57
BRCA1-215ENST00000478531 STAB2Q8WWQ8 2551 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 IGHV3-49A0A0A0MS15 119 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 GOSR2O14653 212 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 IL5P05113 134 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SLC25A4P12235 298 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 CBLN1P23435 193 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 OR10J1P30954 320 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 S100A10P60903 97 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 NPIPB3Q92617 1050 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SLC35E1Q96K37 410 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 MARVELD1Q9BSK0 173 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 PSENENQ9NZ42 101 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 MLXQ9UH92 298 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 RCL1Q9Y2P8 373 aaKnown RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 STRAPQ9Y3F4 350 aaKnown RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 LSM5Q9Y4Y9 91 aaKnown RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 PUS1Q9Y606 427 aaKnown RBP eCLIP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 TENM3Q9P273 2699 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 IGHV3OR16-13A0A075B7E8 117 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 IGHV3-74A0A0B4J1X5 117 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SSNA1O43805 119 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 PRAF2O60831 178 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SCAF4O95104 1147 aaKnown RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SIX6O95475 246 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 TMEM50AO95807 157 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 PTTG1O95997 202 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 MBPP02686 304 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 ID3Q02535 119 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 CD69Q07108 199 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 GUCA2BQ16661 112 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 OR8G2PQ6IF36 304 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 GSG1LQ6UXU4 331 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF600Q6ZNG1 722 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 TMEM116Q8NCL8 245 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 WDR89Q96FK6 387 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-215ENST00000478531 ZNF414Q96IQ9 312 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SIGLEC8Q9NYZ4 499 aa5.22□□□□□ -1.57
BRCA1-215ENST00000478531 SMCO3A2RU48 225 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 PGPEP1LA6NFU8 196 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 SNRPGP15A8MWD9 76 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 L7N2F9 121 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 IGKV1-17P01599 117 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 IGLC1P0CG04 106 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 ELLP55199 621 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-215ENST00000478531 VAMP2P63027 116 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 DCTN2Q13561 401 aaKnown RBP5.21□□□□□ -1.58
BRCA1-215ENST00000478531 GAMTQ14353 236 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 DEFB114Q30KQ6 69 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 TOMM20LQ6UXN7 152 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM61Q8N0U2 210 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 OR1S2Q8NGQ3 325 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 C2orf50Q96LR7 162 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 GINS3Q9BRX5 216 aa5.21□□□□□ -1.58
BRCA1-215ENST00000478531 TECRQ9NZ01 308 aaKnown RBP5.21□□□□□ -1.58
BRCA1-215ENST00000478531 MRPL27Q9P0M9 148 aaKnown RBP5.21□□□□□ -1.58
BRCA1-215ENST00000478531 CHTOPQ9Y3Y2 248 aaKnown RBP5.21□□□□□ -1.58
BRCA1-215ENST00000478531 TRAV30A0A087WSZ9 112 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 TRAV14DV4A0A0A6YYC5 116 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 IGHV3-66A0A0C4DH42 116 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 C7orf66A4D0T2 115 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 ZFP92A6NM28 416 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 K7EPK0 472 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 CCNKO75909 580 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 METTL15P1P0C7V9 234 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 GPX4P36969 197 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-215ENST00000478531 BCAP31P51572 246 aa5.2□□□□□ -1.58
BRCA1-215ENST00000478531 ATP5IP56385 69 aaPredicted RBP5.2□□□□□ -1.58
BRCA1-215ENST00000478531 RRAS2P62070 204 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms