RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 CLN5O75503 358 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IGHV3-48P01763 117 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 DEFA4P12838 97 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 S100GP29377 79 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 UBE2MP61081 183 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IFITM3Q01628 133 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 C21orf62-AS1Q17RA5 79 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 TMEM128Q5BJH2 165 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 DEFB121Q5J5C9 76 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 ZNF57Q68EA5 555 aaPredicted RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 PRSS54Q6PEW0 395 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 TOMM5Q8N4H5 51 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 DEFB125Q8N687 156 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 STPG3Q8N7X2 389 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 TMEM116Q8NCL8 245 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 WWC2-AS2Q96NR7 200 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SLC25A21Q9BQT8 299 aaPredicted RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RBKSQ9H477 322 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 DAZ1Q9NQZ3 744 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 THYN1Q9P016 225 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SCP2D1Q9UJQ7 156 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 FLVCR2Q9UPI3 526 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IGKV1OR2-108A0A075B7D4 117 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IGHV3-35A0A0C4DH35 117 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 C9orf170A2RU37 121 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SULT1A3P0DMM9 295 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SULT1A4P0DMN0 295 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 CRYBB3P26998 211 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 AKR1C2P52895 323 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 MFAP4P55083 255 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SMCO1Q147U7 214 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 TRIM16LQ309B1 348 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 CNPY1Q3B7I2 92 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 FAM106AQ4KMX7 169 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 PLET1Q6UQ28 207 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 FAM24BQ8N5W8 94 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RNF2Q99496 336 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 ARPC5LQ9BPX5 153 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 PTTG2Q9NZH5 202 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 NAP1L6A6NFF2 107 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 ATG12O94817 140 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 PLA2G1BP04054 148 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 HTR2BP41595 481 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 PAX9P55771 341 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 CD81P60033 236 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IL15RAQ13261 267 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RBMS2Q15434 407 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 TATDN3Q17R31 274 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SGPP2Q8IWX5 399 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 THAP8Q8NA92 274 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 SLC24A4Q8NFF2 622 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 ST8SIA2Q92186 375 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RCHY1Q96PM5 261 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 C7orf50Q9BRJ6 194 aaKnown RBP3.13□□□□□ -1.91
POLR2B-208ENST00000478188 HINT2Q9BX68 163 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 RETNQ9HD89 108 aa3.13□□□□□ -1.91
POLR2B-208ENST00000478188 IGHV3OR16-8A0A075B7F1 116 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 TRAV2A0A0B4J234 112 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 FAM90A26D6RGX4 464 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 CORTO00230 105 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 LY86O95711 162 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 GIG44P09565 113 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 AKR1C4P17516 323 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 HOXA1P49639 335 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 AP3S2P59780 193 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 SRPXP78539 464 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 ERHP84090 104 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 DHRS2Q13268 280 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 USF2Q15853 346 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 TIGITQ495A1 244 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 GGNBP1Q5YKI7 109 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 TEPPQ6URK8 271 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 ZNF600Q6ZNG1 722 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 LGI3Q8N145 548 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 GLMPQ8WWB7 406 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 SPAG8Q99932 426 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 PALMDQ9NP74 551 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 DNAH11Q96DT5 4516 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 SOCS3O14543 225 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 NUPL2O15504 423 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 ZNF207O43670 478 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 FAUP35544 74 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 YPEL3P61236 119 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 RELQ04864 619 aaPredicted RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 Q56UQ5 140 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 LYG2Q86SG7 212 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 OR1S2Q8NGQ3 325 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 DTD1Q8TEA8 209 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 DCANP1Q8TF63 244 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 SCGB3A2Q96PL1 93 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 OVOL2Q9BRP0 275 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 SRD5A3Q9H8P0 318 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 MAP6D1Q9H9H5 199 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 MCUBQ9NWR8 336 aa3.12□□□□□ -1.91
POLR2B-208ENST00000478188 GAR1Q9NY12 217 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 RCL1Q9Y2P8 373 aaKnown RBP3.12□□□□□ -1.91
POLR2B-208ENST00000478188 ZNF561-AS1K7EIQ3 104 aa3.11□□□□□ -1.91
POLR2B-208ENST00000478188 CYB5BO43169 146 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms