RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 DNASE2O00115 360 aaPredicted RBP2.83□□□□□ -1.96
VPS50-214ENST00000477935 FXYD1O00168 92 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 NDUFA4O00483 81 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 SULT1C4O75897 302 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 DIRAS3O95661 229 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 IGLV2-23P01705 113 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 MAS1P04201 325 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 ISG15P05161 165 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 GLAP06280 429 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 FGF9P31371 208 aaPredicted RBP2.83□□□□□ -1.96
VPS50-214ENST00000477935 FUSP35637 526 aaKnown RBP eCLIP2.83□□□□□ -1.96
VPS50-214ENST00000477935 RPL29P47914 159 aaKnown RBP2.83□□□□□ -1.96
VPS50-214ENST00000477935 TFPI2P48307 235 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 LINC00315P59091 139 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 DEFB131AP59861 70 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 CXCR4P61073 352 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 TPBGQ13641 420 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 TNXAQ16473 311 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 PRSS8Q16651 343 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 PIGYQ3MUY2 71 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 RPL39P5Q59GN2 51 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 DUSP18Q8NEJ0 188 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 OR5D14Q8NGL3 314 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 OR52N1Q8NH53 320 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 TEX47Q8TBZ9 253 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 RNF2Q99496 336 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 AGMATQ9BSE5 352 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 SLC35D1Q9NTN3 355 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 RDH8Q9NYR8 311 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 ABRACLQ9P1F3 81 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 OR1A1Q9P1Q5 309 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 SMPXQ9UHP9 88 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 RFNGQ9Y644 331 aa2.83□□□□□ -1.96
VPS50-214ENST00000477935 TRAV3A0A0B4J244 114 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 LOC100131303A0A0U1RQF7 123 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 LOC107986453A0A1B0GWG9 222 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ZNF670-ZNF695F2Z2N8 137 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 H3BMQ9 156 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 H3BN98 237 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 MRASO14807 208 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 GEMIN2O14893 280 aaKnown RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 CYB5BO43169 146 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 RPP14O95059 124 aaKnown RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 CCNB2O95067 398 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 CRYGCP07315 174 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 DEFA4P12838 97 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 RCC1P18754 421 aaPredicted RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 ATP6V1B2P21281 511 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 SLC2A5P22732 501 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 EMP1P54849 157 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 RBM11P57052 281 aaKnown RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 UBE2KP61086 200 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 DAD1P61803 113 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 HAMPP81172 84 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 GPR176Q14439 515 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 GNMTQ14749 295 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 MAPRE2Q15555 327 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ZSCAN26Q16670 478 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 VMA21Q3ZAQ7 101 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 TMEM69Q5SWH9 247 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 FAM222AQ5U5X8 452 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 OR8G2PQ6IF36 304 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ZNF705AQ6ZN79 300 aaPredicted RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 SSX9Q7RTT3 188 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 OR13C9Q8NGT0 318 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 OR4K15Q8NH41 348 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 TNFAIP8L1Q8WVP5 186 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ACOT12Q8WYK0 555 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 PYURFQ96I23 114 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 GPER1Q99527 375 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 S100A13Q99584 98 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 HOPXQ9BPY8 73 aaPredicted RBP2.82□□□□□ -1.96
VPS50-214ENST00000477935 C20orf24Q9BUV8 137 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 RHPN1-AS1Q9BWJ2 59 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 METTL9Q9H1A3 318 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ARMC1Q9NVT9 282 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 ZNF586Q9NXT0 402 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 IL36GQ9NZH8 169 aa2.82□□□□□ -1.96
VPS50-214ENST00000477935 TRAV14DV4A0A0A6YYC5 116 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 IGHV7-4-1A0A0J9YVY3 117 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 METTL15A6NJ78 407 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF705FA8MVS1 300 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 K7EP13 123 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 TNFRSF11BO00300 401 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 SC5DO75845 299 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 FABP3P05413 133 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 MRPL3P09001 348 aaKnown RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF705DP0CH99 300 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 ZNF705BP0CI00 300 aaPredicted RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 MT1HL1P0DM35 61 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 GTF2F2P13984 249 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 RPA2P15927 270 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 SNRPGP62308 76 aaKnown RBP2.81□□□□□ -1.96
VPS50-214ENST00000477935 LAGE3Q14657 143 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 GINS1Q14691 196 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 RTL8BQ17RB0 113 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 UBE2UQ5VVX9 321 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 GLYATQ6IB77 296 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 PLEKHG7Q6ZR37 379 aa2.81□□□□□ -1.96
VPS50-214ENST00000477935 CROCCP2Q86T23 111 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms