RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 NFE4Q86UQ8 179 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 LRTM2Q8N967 370 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 CCDC71LQ8N9Z2 235 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 KLHL30-AS1Q8NEE0 82 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 OR5B3Q8NH48 314 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 IL22RA2Q969J5 263 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 CLCC1Q96S66 551 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 C7orf50Q9BRJ6 194 aaKnown RBP3.98□□□□□ -1.77
VPS45-207ENST00000477558 NAA60Q9H7X0 242 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 SCP2D1Q9UJQ7 156 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 TGP01266 2768 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 SORL1Q92673 2214 aa3.98□□□□□ -1.77
VPS45-207ENST00000477558 IGLV5-45A0A087WSX0 123 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 A0A0B4J293 547 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 CCL24O00175 119 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 KRASP01116 189 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 PGAM2P15259 253 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 PSMB6P28072 239 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 LINC01547P58512 204 aaPredicted RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 UBE2MP61081 183 aaKnown RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 ERVK-16P61578 105 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 GNB1P62873 340 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 PRCDQ00LT1 54 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 EGFEM1PQ0D2K5 195 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 TMEM187Q14656 261 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 TMEM128Q5BJH2 165 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 ZNF343Q6P1L6 599 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 SSX9Q7RTT3 188 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 HSD17B13Q7Z5P4 300 aaPredicted RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 SLC25A42Q86VD7 318 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 FAM219AQ8IW50 185 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 FAM223AQ8IWN6 122 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 CENPSQ8N2Z9 138 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 S100ZQ8WXG8 99 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 RBPMSQ93062 196 aaKnown RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 LSM10Q969L4 123 aaKnown RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 ZNF414Q96IQ9 312 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 USMG5Q96IX5 58 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 SCGB3A2Q96PL1 93 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 COA4Q9NYJ1 87 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 COPZ2Q9P299 210 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 PRNDQ9UKY0 176 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 TBC1D24Q9ULP9 559 aa3.97□□□□□ -1.77
VPS45-207ENST00000477558 C14orf166Q9Y224 244 aaKnown RBP3.97□□□□□ -1.77
VPS45-207ENST00000477558 A0A0B4J2A0 478 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 A0A0G2JLM5 398 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 TEX50A0A1B0GTY4 177 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 DUXBA0A1W2PPF3 345 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 L7N2F9 121 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 PITX3O75364 302 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 CNIH1O95406 144 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 SERPINE2P07093 398 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 FCGR2BP31994 310 aaPredicted RBP3.96□□□□□ -1.77
VPS45-207ENST00000477558 MFAP2P55001 183 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 TPPP2P59282 170 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 SRPXP78539 464 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 IFITM3Q01628 133 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 GAGE2BQ13066 116 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 ASAH1Q13510 395 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 RGS21Q2M5E4 152 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 DEFB136Q30KP8 78 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 SP6Q3SY56 376 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 GAGE2EQ4V326 116 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 TRIQKQ629K1 86 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 GAGE2AQ6NT46 116 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 SELENOHQ8IZQ5 122 aaKnown RBP3.96□□□□□ -1.77
VPS45-207ENST00000477558 SLC35G3Q8N808 338 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 NECAP1Q8NC96 275 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 OR1L8Q8NGR8 309 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 OR52E5Q8NH55 327 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 CASTOR1Q8WTX7 329 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 ST6GAL2Q96JF0 529 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 C17orf77Q96MU5 243 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 COMMD5Q9GZQ3 224 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 MCUBQ9NWR8 336 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 FKBP11Q9NYL4 201 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 GAGE2DQ9UEU5 116 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 SHPKQ9UHJ6 478 aa3.96□□□□□ -1.77
VPS45-207ENST00000477558 A0A087WW49 117 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.95□□□□□ -1.78
VPS45-207ENST00000477558 LYRM1O43325 122 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 UPK1BO75841 260 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 ATG12O94817 140 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 SFT2D2O95562 160 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 DUS4LO95620 317 aaKnown RBP3.95□□□□□ -1.78
VPS45-207ENST00000477558 TRBV12-3P01733 135 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 HLA-AP01891 365 aaKnown RBP3.95□□□□□ -1.78
VPS45-207ENST00000477558 PRH1P02810 166 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 TRGV3P03979 118 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 OR8U8P0C7N1 319 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 TRAPPC2P0DI81 140 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 TRAPPC2BP0DI82 140 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 APELAP0DMC3 54 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 SLC25A6P12236 298 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 HIST1H1BP16401 226 aaKnown RBP3.95□□□□□ -1.78
VPS45-207ENST00000477558 M6PRP20645 277 aa3.95□□□□□ -1.78
VPS45-207ENST00000477558 HOXA1P49639 335 aaPredicted RBP3.95□□□□□ -1.78
VPS45-207ENST00000477558 CCR6P51684 374 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms