RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 MED13Q9UHV7 2174 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 IGLV3-9A0A075B6K5 115 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 TCRBV4S1A1TA0A5B7 111 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 C2orf70A6NJV1 201 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 CT45A6P0DMU7 189 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 CT45A5P0DMU8 189 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 CT45A7P0DMV0 189 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 TNFSF4P23510 183 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 MYCNOSP40205 109 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 SLC35B1P78383 322 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 HOXA4Q00056 320 aaPredicted RBP10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 TMEM177Q53S58 311 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 MOGAT3Q86VF5 341 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 BBC3Q96PG8 261 aaPredicted RBP10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 C7orf69Q9H7B7 122 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 FZR1Q9UM11 496 aa10.99□□□□□ -0.65
HLA-DMA-208ENST00000477541 PCP4P48539 62 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 HBBP68871 147 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 C9orf106Q8NAJ2 232 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 OR9G1Q8NH87 305 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 WNT10AQ9GZT5 417 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 IGHV3OR15-7A0A075B7D8 119 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 IGHV2-70DA0A0C4DH43 119 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 hADV38S2A0JD32 116 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 A8MWL6 223 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 RPL8P62917 257 aaKnown RBP10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 MEF2CQ06413 473 aaPredicted RBP10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 LRRC10Q5BKY1 277 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 ETFRF1Q6IPR1 90 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 OR4F17Q8NGA8 305 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 TMEM167AQ8TBQ9 72 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 PERPQ96FX8 193 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF355PQ9NSJ1 428 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 LINC00312Q9Y6C7 94 aa10.98□□□□□ -0.65
HLA-DMA-208ENST00000477541 TRAV30A0A087WSZ9 112 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 HLA-DRB1P01911 266 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 ANKRD39Q53RE8 183 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 TIMM23BQ5SRD1 257 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 EBLN2Q6P2I7 272 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF788Q6ZQV5 615 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 ARL6IP6Q8N6S5 226 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 C8orf31Q8N9H6 132 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 C22orf15Q8WYQ4 148 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 FXYD5Q96DB9 178 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 FMC1Q96HJ9 113 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 GPR82Q96P67 336 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 GAFA1Q96PS6 74 aa10.97□□□□□ -0.65
HLA-DMA-208ENST00000477541 CYSRT1A8MQ03 144 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 HIGD1CA8MV81 97 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 CCL25O15444 150 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 CDKN1BP46527 198 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 PAX2Q02962 417 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 SAPCD1Q5SSQ6 148 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 PDPNQ86YL7 162 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 OR5AN1Q8NGI8 311 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 OR10X1Q8NGY0 326 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 ITLN1Q8WWA0 313 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 PRSS22Q9GZN4 317 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 RPP21Q9H633 154 aaKnown RBP10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 EPDR1Q9UM22 224 aa10.96□□□□□ -0.65
HLA-DMA-208ENST00000477541 TRAV17A0A0B4J275 112 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 SRRM4A7MD48 611 aaKnown RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 IGLL1P15814 213 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 GATA2P23769 480 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 GDF5OSQ5U4N7 250 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 TEX36Q5VZQ5 186 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 PET117Q6UWS5 81 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 MOB3BQ86TA1 216 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 FAM168AQ92567 244 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 LEAP2Q969E1 77 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 MLST8Q9BVC4 326 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 MS4A6AQ9H2W1 248 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 CDX4O14627 284 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 FSTL3O95633 263 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 IGHV3-7P01780 117 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 MYOD1P15172 320 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 HINT1P49773 126 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 FBLN7Q53RD9 439 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 Q56UQ5 140 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 PVRIGQ6DKI7 326 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 C12orf54Q6X4T0 127 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 ZCCHC24Q8N2G6 241 aaKnown RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 HARBI1Q96MB7 349 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 NDFIP1Q9BT67 221 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
HLA-DMA-208ENST00000477541 AHCTF1Q8WYP5 2266 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 MBD3L4A6NDZ8 208 aaPredicted RBP10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 MBD3L3A6NE82 208 aaPredicted RBP10.94□□□□□ -0.66
HLA-DMA-208ENST00000477541 MBD3L5A6NJ08 208 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms