RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 HYLS1Q96M11 299 aa12.48□□□□□ -0.41
VHL-203ENST00000477538 FBXL17Q9UF56 701 aa12.48□□□□□ -0.41
VHL-203ENST00000477538 IGHV4OR15-8A0A075B7B6 117 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 A0A087WW49 117 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 UBE2L5PA0A1B0GUS4 154 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 BMPR1BO00238 502 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 NUPL2O15504 423 aaKnown RBP12.47□□□□□ -0.41
VHL-203ENST00000477538 SCGB2A1O75556 95 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 HSPB1P04792 205 aaKnown RBP12.47□□□□□ -0.41
VHL-203ENST00000477538 OR10J1P30954 320 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 EIF2B2P49770 351 aaKnown RBP12.47□□□□□ -0.41
VHL-203ENST00000477538 OR2F1Q13607 317 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 ZNF345Q14585 488 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 VWC2Q2TAL6 325 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 TMEM144Q7Z5S9 345 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 THAP8Q8NA92 274 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 OR11H1Q8NG94 326 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 ATP5SQ99766 215 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 NPVFQ9HCQ7 196 aa12.47□□□□□ -0.41
VHL-203ENST00000477538 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 DFFBO76075 338 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 CTSGP08311 255 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 ADMP35318 185 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 KRTAP21-3Q3LHN1 58 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 TIGITQ495A1 244 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 OR1N2Q8NGR9 330 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 DPF1Q92782 380 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 RAX2Q96IS3 184 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 DUX3Q96PT4 197 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 CHRDL1Q9BU40 450 aa12.46□□□□□ -0.41
VHL-203ENST00000477538 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 IGKV1OR2-108A0A075B7D4 117 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 LINC01619G3V211 115 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 CCL24O00175 119 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 GGCTO75223 188 aaKnown RBP12.45□□□□□ -0.42
VHL-203ENST00000477538 IGKV1-17P01599 117 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 CXCL2P19875 107 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 ZNF616Q08AN1 781 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 TEPPQ6URK8 271 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 KCNRGQ8N5I3 272 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 WFDC1Q9HC57 220 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
VHL-203ENST00000477538 A0A0D9SG52 128 aa12.44□□□□□ -0.42
VHL-203ENST00000477538 ZP3P21754 424 aa12.44□□□□□ -0.42
VHL-203ENST00000477538 RPEL1Q2QD12 228 aa12.44□□□□□ -0.42
VHL-203ENST00000477538 TRGV9Q99603 122 aa12.44□□□□□ -0.42
VHL-203ENST00000477538 IGHV3-35A0A0C4DH35 117 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 OR2C1O95371 312 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 IFNA5P01569 189 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 FGF7P21781 194 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 HOXD3P31249 432 aaPredicted RBP12.43□□□□□ -0.42
VHL-203ENST00000477538 SLURP1P55000 103 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 YPEL3P61236 119 aaPredicted RBP12.43□□□□□ -0.42
VHL-203ENST00000477538 RELQ04864 619 aaPredicted RBP12.43□□□□□ -0.42
VHL-203ENST00000477538 FHL3Q13643 280 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 BTNL8Q6UX41 500 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 ZNF600Q6ZNG1 722 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 OR4F17Q8NGA8 305 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 OR4F4Q96R69 305 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 ARL6Q9H0F7 186 aa12.43□□□□□ -0.42
VHL-203ENST00000477538 LSM4Q9Y4Z0 139 aaKnown RBP12.43□□□□□ -0.42
VHL-203ENST00000477538 TAAR5O14804 337 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 FABP1P07148 127 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 MYCNOSP40205 109 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 ZNF90Q03938 601 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 RAB31Q13636 194 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 ZNF266Q14584 549 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 LGALSLQ3ZCW2 172 aaPredicted RBP12.42□□□□□ -0.42
VHL-203ENST00000477538 TMUB2Q71RG4 321 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 MGST2Q99735 147 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 ARPC5LQ9BPX5 153 aa12.42□□□□□ -0.42
VHL-203ENST00000477538 WDR61Q9GZS3 305 aaKnown RBP12.42□□□□□ -0.42
VHL-203ENST00000477538 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 NDUFA4O00483 81 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 AGPAT2O15120 278 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 MPDU1O75352 247 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 TOMM40O96008 361 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 PF4P02776 101 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 NKX2-5P52952 324 aaPredicted RBP12.41□□□□□ -0.42
VHL-203ENST00000477538 CYP2G1PQ6ZSU1 146 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 GPHB5Q86YW7 130 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 C9orf62Q8N4C0 152 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 SCGB1C1Q8TD33 95 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 ZNF414Q96IQ9 312 aa12.41□□□□□ -0.42
VHL-203ENST00000477538 PARD6GQ9BYG4 376 aaPredicted RBP12.41□□□□□ -0.42
VHL-203ENST00000477538 PUS1Q9Y606 427 aaKnown RBP eCLIP12.41□□□□□ -0.42
VHL-203ENST00000477538 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 BOLA2-SMG1P6H3BVE0 249 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 M0QZ24 198 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 BCL2L11O43521 198 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 RD3LP0DJH9 198 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 PSG1P11464 419 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 CAMLGP49069 296 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 SELENOTP62341 195 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 FAM106AQ4KMX7 169 aa12.4□□□□□ -0.42
VHL-203ENST00000477538 RPL7L1Q6DKI1 246 aaKnown RBP12.4□□□□□ -0.42
VHL-203ENST00000477538 C1QL4Q86Z23 238 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms