RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 NUPL2O15504 423 aaKnown RBP12.07□□□□□ -0.48
COPS3-207ENST00000477299 SLC25A4P12235 298 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 NHLH2Q02577 135 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 SAMD5Q5TGI4 173 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 ETFRF1Q6IPR1 90 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 SPSB3Q6PJ21 355 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 TMEM252Q8N6L7 170 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 ATP6V0BQ99437 205 aa12.07□□□□□ -0.48
COPS3-207ENST00000477299 LYRM2Q9NU23 88 aaPredicted RBP12.07□□□□□ -0.48
COPS3-207ENST00000477299 TMEM213A2RRL7 107 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 SAP30O75446 220 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 LY86O95711 162 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 OR10J1P30954 320 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 KRTAP10-11P60412 298 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 ZNF90Q03938 601 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 FAM106AQ4KMX7 169 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 TOMM20LQ6UXN7 152 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 TMEM182Q6ZP80 229 aaPredicted RBP12.06□□□□□ -0.48
COPS3-207ENST00000477299 REC114Q7Z4M0 266 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 TMEM217Q8N7C4 229 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 SLC35E1Q96K37 410 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 C20orf24Q9BUV8 137 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 MBD2Q9UBB5 411 aa12.06□□□□□ -0.48
COPS3-207ENST00000477299 NOTCH1P46531 2555 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 IGHV3-49A0A0A0MS15 119 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 A0A1B0GVG6 124 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 C2orf70A6NJV1 201 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 SMLR1H3BR10 107 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 LGALS9O00182 355 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 NDUFA4O00483 81 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 YIF1AO95070 293 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 PRB2P02812 416 aaPredicted RBP12.05□□□□□ -0.48
COPS3-207ENST00000477299 PVALBP20472 110 aaPredicted RBP12.05□□□□□ -0.48
COPS3-207ENST00000477299 TMEM190Q8WZ59 177 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 ZFAND3Q9H8U3 227 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
COPS3-207ENST00000477299 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
COPS3-207ENST00000477299 DNAH3Q8TD57 4116 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 SORL1Q92673 2214 aa12.05□□□□□ -0.48
COPS3-207ENST00000477299 hCG_2014768A0A024R1R8 64 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 IGHV3OR16-13A0A075B7E8 117 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 IGHV3-74A0A0B4J1X5 117 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 E5RGE8 158 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 G3V3Q6 166 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 RLN2P04090 185 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 GATA2P23769 480 aaPredicted RBP12.04□□□□□ -0.48
COPS3-207ENST00000477299 OR2F1Q13607 317 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 ZNF600Q6ZNG1 722 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 OR10P1Q8NGE3 313 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 OR1S2Q8NGQ3 325 aa12.04□□□□□ -0.48
COPS3-207ENST00000477299 IZUMO1RA6ND01 250 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 APOHP02749 345 aaPredicted RBP12.03□□□□□ -0.48
COPS3-207ENST00000477299 GIPP09681 153 aaPredicted RBP12.03□□□□□ -0.48
COPS3-207ENST00000477299 PSG1P11464 419 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 FOLR2P14207 255 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 CBLN1P23435 193 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 P2RY1P47900 373 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 SULT1A1P50225 295 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 DLK1P80370 383 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 AKR1C1Q04828 323 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 SLC38A11Q08AI6 406 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 BEAN1Q3B7T3 259 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 C9orf66Q5T8R8 295 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 THAP8Q8NA92 274 aa12.03□□□□□ -0.48
COPS3-207ENST00000477299 TRAV30A0A087WSZ9 112 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 ZFP92A6NM28 416 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 A8MWP6 167 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 LYL1P12980 280 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 EWSR1Q01844 656 aaKnown RBP eCLIP12.02□□□□□ -0.49
COPS3-207ENST00000477299 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
COPS3-207ENST00000477299 LILRB2Q8N423 598 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
COPS3-207ENST00000477299 ELOVL1Q9BW60 279 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 MLXQ9UH92 298 aa12.02□□□□□ -0.49
COPS3-207ENST00000477299 YPEL3P61236 119 aaPredicted RBP12.01□□□□□ -0.49
COPS3-207ENST00000477299 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
COPS3-207ENST00000477299 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
COPS3-207ENST00000477299 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
COPS3-207ENST00000477299 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
COPS3-207ENST00000477299 TOMM40O96008 361 aa12□□□□□ -0.49
COPS3-207ENST00000477299 IGLV1-51P01701 117 aa12□□□□□ -0.49
COPS3-207ENST00000477299 RD3LP0DJH9 198 aa12□□□□□ -0.49
COPS3-207ENST00000477299 C8orf88P0DMB2 117 aa12□□□□□ -0.49
COPS3-207ENST00000477299 RPL12P30050 165 aaKnown RBP12□□□□□ -0.49
COPS3-207ENST00000477299 RAP2BP61225 183 aa12□□□□□ -0.49
COPS3-207ENST00000477299 USF2Q15853 346 aaPredicted RBP12□□□□□ -0.49
COPS3-207ENST00000477299 STPG3Q8N7X2 389 aa12□□□□□ -0.49
COPS3-207ENST00000477299 OR51G1Q8NGK1 321 aa12□□□□□ -0.49
COPS3-207ENST00000477299 OR2T35Q8NGX2 323 aa12□□□□□ -0.49
COPS3-207ENST00000477299 THAP6Q8TBB0 222 aa12□□□□□ -0.49
COPS3-207ENST00000477299 Q8WTZ3 238 aa12□□□□□ -0.49
COPS3-207ENST00000477299 TRGV9Q99603 122 aa12□□□□□ -0.49
COPS3-207ENST00000477299 SMIM3Q9BZL3 60 aa12□□□□□ -0.49
COPS3-207ENST00000477299 NPVFQ9HCQ7 196 aa12□□□□□ -0.49
COPS3-207ENST00000477299 UFC1Q9Y3C8 167 aa12□□□□□ -0.49
COPS3-207ENST00000477299 IGHV7-4-1A0A0J9YVY3 117 aa11.99□□□□□ -0.49
COPS3-207ENST00000477299 WI2-2373I1.2A0A1W2PRP0 233 aa11.99□□□□□ -0.49
COPS3-207ENST00000477299 K7EMT4 169 aa11.99□□□□□ -0.49
COPS3-207ENST00000477299 WIPF1O43516 503 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms