RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SIGLEC15Q6ZMC9 328 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 C5orf30Q96GV9 206 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 SPTBN2O15020 2390 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 MEGF9Q9H1U4 602 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 RPL23P62829 140 aaKnown RBP15.43■□□□□ 0.06
VARS2-209ENST00000477288 VMO1Q7Z5L0 202 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 PRDM13Q9H4Q3 707 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 JPT2Q9H910 190 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 PTPRFP10586 1907 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 ALPK2Q86TB3 2170 aa15.43■□□□□ 0.06
VARS2-209ENST00000477288 A0A087WX48 190 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 TRAV41A0A0B4J266 112 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 IGHV1-46P01743 117 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 PIKFYVEQ9Y2I7 2098 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 CD300EQ496F6 205 aaPredicted RBP15.42■□□□□ 0.06
VARS2-209ENST00000477288 SPOCK3Q9BQ16 436 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 PRADC1Q9BSG0 188 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 MDC1Q14676 2089 aaKnown RBP15.42■□□□□ 0.06
VARS2-209ENST00000477288 FOXF2Q12947 444 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 RPL35AP18077 110 aaKnown RBP15.42■□□□□ 0.06
VARS2-209ENST00000477288 PLNP26678 52 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 TRBV6-7A0A0A0MS04 114 aa15.42■□□□□ 0.06
VARS2-209ENST00000477288 ZNF672Q499Z4 452 aaPredicted RBP15.41■□□□□ 0.06
VARS2-209ENST00000477288 ZNF497Q6ZNH5 498 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 FXYD7P58549 80 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 IGKV1D-13A0A0B4J2D9 117 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 IGHV3-53P01767 116 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 IGKV1-13P0DP09 117 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 CD59P13987 128 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 SRSF7Q16629 238 aaKnown RBP eCLIP15.41■□□□□ 0.062e-6■■□□□ 14
VARS2-209ENST00000477288 Q5PR19 223 aa15.41■□□□□ 0.06
VARS2-209ENST00000477288 A0A1B0GTI1 187 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 LOC102723996A0A087X1L8 192 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 IGKCP01834 107 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 C18orf12Q96KH6 178 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 TRAV9-1A0A075B6T8 112 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 SHISA3A0PJX4 238 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 KLRD1Q13241 179 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 FAM166AQ6J272 317 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 LYZL4Q96KX0 146 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 RCHY1Q96PM5 261 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 ORMDL2Q53FV1 153 aa15.4■□□□□ 0.06
VARS2-209ENST00000477288 TMEM8BA6NDV4 472 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 CCL20P78556 96 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 IGLV3-12A0A075B6K2 115 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 IGKV2-40A0A087WW87 121 aaPredicted RBP15.39■□□□□ 0.05
VARS2-209ENST00000477288 M0R2P5 195 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 IGKV2D-40P01614 121 aaPredicted RBP15.39■□□□□ 0.05
VARS2-209ENST00000477288 EFNA4P52798 201 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 ZFP36L1Q07352 338 aaKnown RBP15.39■□□□□ 0.05
VARS2-209ENST00000477288 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 FOXL1Q12952 345 aa15.39■□□□□ 0.05
VARS2-209ENST00000477288 SCN2AQ99250 2005 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 NPIPB5A8MRT5 1133 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 PRR31Q5SQ13 230 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 OR10W1Q8NGF6 305 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 OVOL1O14753 267 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 LINC00114Q6XXX2 140 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 CARHSP1Q9Y2V2 147 aaKnown RBP15.38■□□□□ 0.05
VARS2-209ENST00000477288 TRAV5A0A0B4J249 113 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 C1QL4Q86Z23 238 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 PAX4O43316 350 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 TBX6O95947 436 aaPredicted RBP15.38■□□□□ 0.05
VARS2-209ENST00000477288 TOMM40O96008 361 aa15.38■□□□□ 0.05
VARS2-209ENST00000477288 RPL15P61313 204 aaKnown RBP15.38■□□□□ 0.05
VARS2-209ENST00000477288 SRSF4Q08170 494 aaKnown RBP15.38■□□□□ 0.05
VARS2-209ENST00000477288 MLNRO43193 412 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 GZMBP10144 247 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 LAMTOR2Q9Y2Q5 125 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 ZNF318Q5VUA4 2279 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 CCL1P22362 96 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 LILRA1O75019 489 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 HIST1H4AP62805 103 aaKnown RBP15.37■□□□□ 0.05
VARS2-209ENST00000477288 BRD3OSQ6XYD6 125 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 LAMTOR3Q9UHA4 124 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 ABCA7Q8IZY2 2146 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 SNRNP200O75643 2136 aaKnown RBP15.37■□□□□ 0.05
VARS2-209ENST00000477288 TRGV1A0A0A0MS02 117 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 IGHV2-26A0A0B4J1V2 119 aa15.37■□□□□ 0.05
VARS2-209ENST00000477288 LINC00271P0C7V0 271 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 CFHR1Q03591 330 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 MORN3Q6PF18 240 aaPredicted RBP15.36■□□□□ 0.05
VARS2-209ENST00000477288 ANAPC13Q9BS18 74 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 A0A087WWC5 75 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 ATXN8Q156A1 80 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 NAPSAO96009 420 aa15.36■□□□□ 0.05
VARS2-209ENST00000477288 FGFBP3Q8TAT2 258 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 ATP5L2Q7Z4Y8 100 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 IGFBP3P17936 291 aaPredicted RBP15.35■□□□□ 0.05
VARS2-209ENST00000477288 PRCDQ00LT1 54 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 UNQ6494/PRO21346Q6UXR6 183 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 CMC4P56277 68 aaPredicted RBP15.35■□□□□ 0.05
VARS2-209ENST00000477288 MESP1Q9BRJ9 268 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 INS-IGF2F8WCM5 200 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 INSP01308 110 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 LAIR2Q6ISS4 152 aa15.35■□□□□ 0.05
VARS2-209ENST00000477288 C15orf32Q32M92 178 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 LTBP1Q14766 1721 aa15.34■□□□□ 0.05
VARS2-209ENST00000477288 ZNF474Q6S9Z5 364 aaPredicted RBP15.34■□□□□ 0.05
VARS2-209ENST00000477288 RNF222A6NCQ9 220 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms