RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ACANP16112 2415 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 TRBV9A0A0B4J1U6 114 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 M0QZK8 103 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 CD5P06127 495 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 TMEM37Q8WXS4 190 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 TRGV9Q99603 122 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 RARRES2Q99969 163 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
COL4A6-206ENST00000477085 TMPRSS5Q9H3S3 457 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
COL4A6-206ENST00000477085 TRAV41A0A0B4J266 112 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 CTXND1A0A1B0GTU2 59 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 MAP1LC3B2A6NCE7 125 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 CYB5BO43169 146 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 IGHV3-23P01764 117 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 PATE2Q6UY27 113 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 SIGLECL1Q8N7X8 197 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 OR5R1Q8NH85 324 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 MAP1LC3BQ9GZQ8 125 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 VPREB3Q9UKI3 123 aa11.29□□□□□ -0.6
COL4A6-206ENST00000477085 CLN5O75503 358 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 CDC34P49427 236 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-206ENST00000477085 GUK1Q16774 197 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 TIGITQ495A1 244 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 UQCC3Q6UW78 93 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 COMMD1Q8N668 190 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 TMEM68Q96MH6 324 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 MS4A10Q96PG2 267 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 KCNIP2Q9NS61 270 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 NOTCH2Q04721 2471 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
COL4A6-206ENST00000477085 MORN5Q5VZ52 161 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 DUX5Q96PT3 197 aa11.28□□□□□ -0.6
COL4A6-206ENST00000477085 BTBD17A6NE02 478 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 HBE1P02100 147 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 RHOGP84095 191 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 HAGHQ16775 308 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 TMEM95Q3KNT9 176 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 MIR17HGQ75NE6 70 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 GATAD1Q8WUU5 269 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF414Q96IQ9 312 aa11.27□□□□□ -0.61
COL4A6-206ENST00000477085 TMEM218A2RU14 115 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 RBFOX3A6NFN3 312 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 SCO1O75880 301 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 PSG1P11464 419 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 ADCYAP1P18509 176 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 C15orf32Q32M92 178 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 TREM1Q9NP99 234 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 C21orf62Q9NYP8 219 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 THYN1Q9P016 225 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 DOK5Q9P104 306 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 GNG13Q9P2W3 67 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 A0A1W2PPV4 95 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 OR5G3P0C626 314 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 STAG3L2P0CL84 134 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 STAG3L3P0CL85 134 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 HIST1H1BP16401 226 aaKnown RBP11.26□□□□□ -0.61
COL4A6-206ENST00000477085 MFAP4P55083 255 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 SELENOTP62341 195 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 CFHR3Q02985 330 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 ICAM4Q14773 271 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 EIF5A2Q9GZV4 153 aaKnown RBP11.26□□□□□ -0.61
COL4A6-206ENST00000477085 DNAJC4Q9NNZ3 241 aa11.26□□□□□ -0.61
COL4A6-206ENST00000477085 SONP18583 2426 aaKnown RBP11.25□□□□□ -0.61
COL4A6-206ENST00000477085 TRAV5A0A0B4J249 113 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 SRP14P37108 136 aaKnown RBP11.25□□□□□ -0.61
COL4A6-206ENST00000477085 RHOBP62745 196 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF502Q8TBZ5 544 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 VN1R17PQ8TDU5 208 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF503Q96F45 646 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 UHRF2Q96PU4 802 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
COL4A6-206ENST00000477085 TSPAN9O75954 239 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 CTSGP08311 255 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 NECAP1Q8NC96 275 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
COL4A6-206ENST00000477085 KLK15Q9H2R5 256 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF702PQ9H963 129 aa11.24□□□□□ -0.61
COL4A6-206ENST00000477085 LOC102723971A0A1B0GUV8 181 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 OR2T8A6NH00 312 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 AP4M1O00189 453 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 LY6G6DO95868 133 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 ORM2P19652 201 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 FCGR2BP31994 310 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-206ENST00000477085 ADMP35318 185 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 NPBWR1P48145 328 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 PLP1P60201 277 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 PMS2P11Q13670 270 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 Q56UQ5 140 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 ZNF506Q5JVG8 444 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
COL4A6-206ENST00000477085 CCDC140Q96MF4 163 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms