RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 SLC35B3Q9H1N7 401 aa8.48□□□□□ -1.05
HDAC6-219ENST00000476625 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
HDAC6-219ENST00000476625 F6UB75 175 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 HNRNPCP07910 306 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC6-219ENST00000476625 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 NPY1RP25929 384 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 PRSS3P35030 304 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 AKR1C2P52895 323 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 GPX8Q8TED1 209 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 FCGR1BQ92637 280 aa8.47□□□□□ -1.05
HDAC6-219ENST00000476625 WDR12Q9GZL7 423 aaKnown RBP8.47□□□□□ -1.05
HDAC6-219ENST00000476625 IL4P05112 153 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 HLA-DRB4P13762 266 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 PGAM2P15259 253 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 BSXQ3C1V8 233 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 PRSS54Q6PEW0 395 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 C1orf158Q8N1D5 194 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 ZNF709Q8N972 641 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 NIPSNAP3BQ9BS92 247 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 FAM212BQ9NTI7 297 aaPredicted RBP8.46□□□□□ -1.06
HDAC6-219ENST00000476625 HLA-DRB4X5D2U9 266 aa8.46□□□□□ -1.06
HDAC6-219ENST00000476625 INS-IGF2F8WCM5 200 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 PRB4P10163 310 aaPredicted RBP8.45□□□□□ -1.06
HDAC6-219ENST00000476625 ELK1P19419 428 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 OR10J1P30954 320 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 PIGPP57054 158 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 SIGLEC15Q6ZMC9 328 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 LHFPL5Q8TAF8 219 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 NARS2Q96I59 477 aaKnown RBP8.45□□□□□ -1.06
HDAC6-219ENST00000476625 LINC00052Q96N35 136 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 NRN1Q9NPD7 142 aa8.45□□□□□ -1.06
HDAC6-219ENST00000476625 YTHDF2Q9Y5A9 579 aaKnown RBP8.45□□□□□ -1.06
HDAC6-219ENST00000476625 CORTO00230 105 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 BUB3O43684 328 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 UCP3P55916 312 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 MEF2DQ14814 521 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 TRIM16LQ309B1 348 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 OR4B1Q8NGF8 309 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 OR4D10Q8NGI6 311 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 OR51G1Q8NGK1 321 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 NPIPB3Q92617 1050 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 ACY3Q96HD9 319 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 NEU1Q99519 415 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 PDCD10Q9BUL8 212 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 C1QTNF4Q9BXJ3 329 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 PRR13Q9NZ81 148 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 COMMD3Q9UBI1 195 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 RFNGQ9Y644 331 aa8.44□□□□□ -1.06
HDAC6-219ENST00000476625 C3orf85A0A1B0GTC6 90 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 LOC102723971A0A1B0GUV8 181 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 S100GP29377 79 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 RPL5P46777 297 aaKnown RBP8.43□□□□□ -1.06
HDAC6-219ENST00000476625 SUB1P53999 127 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC6-219ENST00000476625 SNRPD3P62318 126 aaKnown RBP8.43□□□□□ -1.06
HDAC6-219ENST00000476625 FCN2Q15485 313 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 RNF212Q495C1 297 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 LPCAT3Q6P1A2 487 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 LHFPL1Q86WI0 220 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 OR1S2Q8NGQ3 325 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 Q8WTZ3 238 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 C20orf173Q96LM9 149 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 SAV1Q9H4B6 383 aaPredicted RBP8.43□□□□□ -1.06
HDAC6-219ENST00000476625 ENY2Q9NPA8 101 aa8.43□□□□□ -1.06
HDAC6-219ENST00000476625 SOCS3O14543 225 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 HPGDSO60760 199 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 CDK2AP2O75956 126 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 PSG1P11464 419 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 RCVRNP35243 200 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 FUSP35637 526 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC6-219ENST00000476625 RORCP51449 518 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 RND3P61587 244 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 NUTF2P61970 127 aaKnown RBP8.42□□□□□ -1.06
HDAC6-219ENST00000476625 KCTD21Q4G0X4 260 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 SOHLH1Q5JUK2 328 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 FAAP20Q6NZ36 180 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 RNASE11Q8TAA1 199 aaKnown RBP8.42□□□□□ -1.06
HDAC6-219ENST00000476625 GPR146Q96CH1 333 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 PBDC1Q9BVG4 233 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 SCRT2Q9NQ03 307 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 KLK11Q9UBX7 282 aa8.42□□□□□ -1.06
HDAC6-219ENST00000476625 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 ZNF705GA8MUZ8 300 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 CD3DP04234 171 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 NKX2-1P43699 371 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 EIF2B2P49770 351 aaKnown RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 YPEL3P61236 119 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 DAD1P61803 113 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 SPATA12Q7Z6I5 190 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 Q8N1X5 172 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 OR13C8Q8NGS7 320 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 ZNRF2Q8NHG8 242 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 MARCH1Q8TCQ1 289 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 YIPF6Q96EC8 236 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 C7orf50Q9BRJ6 194 aaKnown RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 HEYLQ9NQ87 328 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-219ENST00000476625 CACNG5Q9UF02 275 aa8.41□□□□□ -1.06
HDAC6-219ENST00000476625 NBDYA0A0U1RRE5 68 aa8.4□□□□□ -1.06
HDAC6-219ENST00000476625 TMEM189A5PLL7 270 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms