RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SLC25A4P12235 298 aa15.72■□□□□ 0.11
LIME1-204ENST00000476183 IL7P13232 177 aa15.72■□□□□ 0.11
LIME1-204ENST00000476183 GGTLC1Q9BX51 225 aa15.72■□□□□ 0.11
LIME1-204ENST00000476183 TRAV30A0A087WSZ9 112 aa15.71■□□□□ 0.11
LIME1-204ENST00000476183 LOC102724200A0A096LPH7 203 aaPredicted RBP15.71■□□□□ 0.11
LIME1-204ENST00000476183 PIGBOS1A0A0B4J2F0 54 aa15.71■□□□□ 0.11
LIME1-204ENST00000476183 TFPI2P48307 235 aa15.71■□□□□ 0.11
LIME1-204ENST00000476183 TCF24Q7RTU0 167 aa15.71■□□□□ 0.11
LIME1-204ENST00000476183 DFFBO76075 338 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 HOXB5P09067 269 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 SLC25A6P12236 298 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 OR10J1P30954 320 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 UBE2MP61081 183 aaKnown RBP15.7■□□□□ 0.1
LIME1-204ENST00000476183 NOXA1Q86UR1 476 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 GBGT1Q8N5D6 347 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 OR1S2Q8NGQ3 325 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 NPIPB3Q92617 1050 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 TMED3Q9Y3Q3 217 aa15.7■□□□□ 0.1
LIME1-204ENST00000476183 C9orf170A2RU37 121 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 SCGB2A1O75556 95 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 NPPCP23582 126 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 CRYBB3P26998 211 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 ETFRF1Q6IPR1 90 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 ACY3Q96HD9 319 aa15.69■□□□□ 0.1
LIME1-204ENST00000476183 IAPPP10997 89 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 BMI1P35226 326 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 YPEL3P61236 119 aaPredicted RBP15.68■□□□□ 0.1
LIME1-204ENST00000476183 ZNF124Q15973 351 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 CASC10Q5T4H9 136 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 GGNBP1Q5YKI7 109 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 APRG1Q8IVJ8 170 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 METTL26Q96S19 204 aa15.68■□□□□ 0.1
LIME1-204ENST00000476183 C7orf50Q9BRJ6 194 aaKnown RBP15.68■□□□□ 0.1
LIME1-204ENST00000476183 FAM90A26D6RGX4 464 aa15.67■□□□□ 0.1
LIME1-204ENST00000476183 PLA2G10O15496 165 aa15.67■□□□□ 0.1
LIME1-204ENST00000476183 IFNA4P05014 189 aa15.67■□□□□ 0.1
LIME1-204ENST00000476183 MS4A6AQ9H2W1 248 aa15.67■□□□□ 0.1
LIME1-204ENST00000476183 CENPXA8MT69 81 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 ADAP1O75689 374 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 CD5P06127 495 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 OR4E1P0C645 316 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 LYL1P12980 280 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 ANXA7P20073 488 aaKnown RBP15.66■□□□□ 0.1
LIME1-204ENST00000476183 ATP5IP56385 69 aaPredicted RBP15.66■□□□□ 0.1
LIME1-204ENST00000476183 DHRS2Q13268 280 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 WFDC3Q8IUB2 231 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 Q8WTZ3 238 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 OVOL2Q9BRP0 275 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 MAGT1Q9H0U3 335 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 U3KQE9 123 aa15.66■□□□□ 0.1
LIME1-204ENST00000476183 MPTX1A8MV57 137 aa15.65■□□□□ 0.1
LIME1-204ENST00000476183 FAM24BQ8N5W8 94 aa15.65■□□□□ 0.1
LIME1-204ENST00000476183 TMEM231Q9H6L2 316 aa15.65■□□□□ 0.1
LIME1-204ENST00000476183 MAP6D1Q9H9H5 199 aa15.65■□□□□ 0.1
LIME1-204ENST00000476183 A0A1W2PS18 150 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 TOMM40O96008 361 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 RPL35AP18077 110 aaKnown RBP15.64■□□□□ 0.09
LIME1-204ENST00000476183 GPX4P36969 197 aaPredicted RBP15.64■□□□□ 0.09
LIME1-204ENST00000476183 P2RY1P47900 373 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 RPL11P62913 178 aaKnown RBP15.64■□□□□ 0.09
LIME1-204ENST00000476183 PAFAH1B2P68402 229 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 GAMTQ14353 236 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 USF2Q15853 346 aaPredicted RBP15.64■□□□□ 0.09
LIME1-204ENST00000476183 ZFAND6Q6FIF0 208 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 LYG2Q86SG7 212 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 SACSQ9NZJ4 4579 aa15.64■□□□□ 0.09
LIME1-204ENST00000476183 TENM2Q9NT68 2774 aa15.63■□□□□ 0.09
LIME1-204ENST00000476183 IGKV1D-37A0A075B6S9 117 aa15.63■□□□□ 0.09
LIME1-204ENST00000476183 SYNGR2O43760 224 aa15.63■□□□□ 0.09
LIME1-204ENST00000476183 MED6O75586 246 aa15.63■□□□□ 0.09
LIME1-204ENST00000476183 IL4P05112 153 aa15.63■□□□□ 0.09
LIME1-204ENST00000476183 TRAV2A0A0B4J234 112 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 DNASE2O00115 360 aaPredicted RBP15.62■□□□□ 0.09
LIME1-204ENST00000476183 WRBO00258 174 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 LYRM1O43325 122 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 HNRNPCP07910 306 aaKnown RBP eCLIP15.62■□□□□ 0.09
LIME1-204ENST00000476183 RD3LP0DJH9 198 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 PSG1P11464 419 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 APOC4P55056 127 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 CMC4P56277 68 aaPredicted RBP15.62■□□□□ 0.09
LIME1-204ENST00000476183 C4orf46Q504U0 113 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 COQ8AQ8NI60 647 aa15.62■□□□□ 0.09
LIME1-204ENST00000476183 PAIP2BQ9ULR5 123 aaKnown RBP15.62■□□□□ 0.09
LIME1-204ENST00000476183 KIR2DL5BA0A0G2JN68 375 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 KIR2DL5BA0A0G2JPC4 375 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 KIR2DL5AQ8N109 375 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 KIR2DL5BQ8NHK3 375 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 NARS2Q96I59 477 aaKnown RBP15.61■□□□□ 0.09
LIME1-204ENST00000476183 SLC35E1Q96K37 410 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 CIB3Q96Q77 187 aaPredicted RBP15.61■□□□□ 0.09
LIME1-204ENST00000476183 RABAC1Q9UI14 185 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 LYSTQ99698 3801 aa15.61■□□□□ 0.09
LIME1-204ENST00000476183 PRSS46E5RG02 174 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 DEFB131AP59861 70 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 RAB11AP62491 216 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 ID3Q02535 119 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 ZNF90Q03938 601 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 DEFB135Q30KP9 77 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 C16orf54Q6UWD8 224 aa15.6■□□□□ 0.09
LIME1-204ENST00000476183 Q6ZWC4 215 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms