RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 FAM25AB3EWG3 89 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 FAM25CB3EWG5 89 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 FAM25GB3EWG6 89 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 CD3DP04234 171 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 IGLC1P0CG04 106 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 OR10J1P30954 320 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 RND2P52198 227 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 YPEL3P61236 119 aaPredicted RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 NCS1P62166 190 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 RNASE12Q5GAN4 147 aaKnown RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 MZT2AQ6P582 158 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 OR52E5Q8NH55 327 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 RNASEH2CQ8TDP1 164 aaKnown RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 SEPSECSQ9HD40 501 aaKnown RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 NRN1Q9NPD7 142 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 HEYLQ9NQ87 328 aaPredicted RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.8□□□□□ -1.16
CDRT1-205ENST00000475944 XCL2Q9UBD3 114 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 AGRNO00468 2067 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
CDRT1-205ENST00000475944 PRSS29PA6NIE9 313 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 FAM90A26D6RGX4 464 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 GSTZ1O43708 216 aaPredicted RBP7.79□□□□□ -1.16
CDRT1-205ENST00000475944 IL4P05112 153 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 MED14OSP0DP75 135 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 RORCP51449 518 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 VBP1P61758 197 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 DHODHQ02127 395 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 SCGB2B2Q4G0G5 96 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 AARDQ4LEZ3 155 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 C2orf83Q53S99 150 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 ETFRF1Q6IPR1 90 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 PRSS54Q6PEW0 395 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 ZNF767PQ75MW2 155 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 OR52I2Q8NH67 350 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 TERB2Q8NHR7 220 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 MTFP1Q9UDX5 166 aa7.79□□□□□ -1.16
CDRT1-205ENST00000475944 TMEM189A5PLL7 270 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 CEBPZOSA8MTT3 80 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 H3BMM0 161 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 TNFAIP8O95379 198 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 CDS2O95674 445 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 OR5AC1P0C628 307 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 USF2Q15853 346 aaPredicted RBP7.78□□□□□ -1.16
CDRT1-205ENST00000475944 SIGLEC15Q6ZMC9 328 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 Q6ZRM9 215 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 NOXA1Q86UR1 476 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 SLC24A4Q8NFF2 622 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 C15orf40Q8WUR7 153 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 AP3S1Q92572 193 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 RBPMSQ93062 196 aaKnown RBP7.78□□□□□ -1.16
CDRT1-205ENST00000475944 NEU1Q99519 415 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 TMEM222Q9H0R3 208 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 C14orf166Q9Y224 244 aaKnown RBP7.78□□□□□ -1.16
CDRT1-205ENST00000475944 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
CDRT1-205ENST00000475944 TEX13DA0A0J9YY54 714 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-205ENST00000475944 TEX48A0A1B0GUV7 120 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 M0R2N4 97 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 BUB3O43684 328 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 RAB3DO95716 219 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 TOMM40O96008 361 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 SPART-AS1P0CW21 52 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 RD3LP0DJH9 198 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 NUP62P37198 522 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-205ENST00000475944 NKX2-1P43699 371 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-205ENST00000475944 TAS2R19P59542 299 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 LGALS9BQ3B8N2 356 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF705AQ6ZN79 300 aaPredicted RBP7.77□□□□□ -1.17
CDRT1-205ENST00000475944 TMEM229BQ8NBD8 167 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 OR4D10Q8NGI6 311 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 MARCH1Q8TCQ1 289 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 GLYATL2Q8WU03 294 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 FAM210BQ96KR6 192 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 ABHD1Q96SE0 405 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 EXTL2Q9UBQ6 330 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 CACNG5Q9UF02 275 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 CACFD1Q9UGQ2 172 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 PFDN2Q9UHV9 154 aa7.77□□□□□ -1.17
CDRT1-205ENST00000475944 SMIM9A6NGZ8 99 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF705FA8MVS1 300 aaPredicted RBP7.76□□□□□ -1.17
CDRT1-205ENST00000475944 RTL8CO15255 209 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 IFNA10P01566 189 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 IFNA21P01568 189 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 CD74P04233 296 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF705DP0CH99 300 aaPredicted RBP7.76□□□□□ -1.17
CDRT1-205ENST00000475944 ZNF705BP0CI00 300 aaPredicted RBP7.76□□□□□ -1.17
CDRT1-205ENST00000475944 STEAP1BQ6NZ63 245 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 UBE2DNLQ8IWF7 75 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 LHFPL5Q8TAF8 219 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 ACY3Q96HD9 319 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
CDRT1-205ENST00000475944 IGHV3OR16-12A0A075B7B8 117 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 PSG1P11464 419 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 MEF2DQ14814 521 aa7.75□□□□□ -1.17
CDRT1-205ENST00000475944 SURF2Q15527 256 aaPredicted RBP7.75□□□□□ -1.17
CDRT1-205ENST00000475944 GPR107Q5VW38 600 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms