RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 CCDC115Q96NT0 180 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 MED11Q9P086 117 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 PSORS1C2Q9UIG4 136 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 ASB4Q9Y574 426 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 NUBP2Q9Y5Y2 271 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 MYH7BA7E2Y1 1941 aa2.3□□□□□ -2.04
TM9SF3-204ENST00000475401 ECM29Q5VYK3 1845 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 MED1Q15648 1581 aaPredicted RBP2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 A0A087X0T9 212 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 ODF3BA8MYP8 253 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 H3BT86 120 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 J3QKU1 62 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 CREBL2O60519 120 aaPredicted RBP2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 GADD45GO95257 159 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 RPL7P18124 248 aaKnown RBP2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 RPS3P23396 243 aaKnown RBP eCLIP2.29□□□□□ -2.043e-34■■□□□ 12.4
TM9SF3-204ENST00000475401 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 CCR2P41597 374 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 INSL3P51460 131 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 SMCO1Q147U7 214 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 LYZL1Q6UWQ5 148 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 LHFPL1Q86WI0 220 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 STAG3L4Q8TBR4 150 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 CANT1Q8WVQ1 401 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 SCGB3A1Q96QR1 104 aa2.29□□□□□ -2.04
TM9SF3-204ENST00000475401 BCL9O00512 1426 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 TECPR2O15040 1411 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 MEIS3P1A6NDR6 274 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 ARRDC5A6NEK1 342 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 H7BYZ3 331 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 TRGC2P03986 189 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 BPGMP07738 259 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 OR10J4P0C629 311 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 NFYAP23511 347 aaPredicted RBP2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 GTF2A1P52655 376 aaPredicted RBP2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 EMP1P54849 157 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 SUPT4H1P63272 117 aaKnown RBP2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 FKBP1CQ5VVH2 108 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 TRAPPC6BQ86SZ2 158 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 PRR15Q8IV56 129 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 MSRB3Q8IXL7 192 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 HIST3H2BBQ8N257 126 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 OR8D4Q8NGM9 314 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 DOHHQ9BU89 302 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 TMEM126AQ9H061 195 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 RASL12Q9NYN1 266 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 NAT8Q9UHE5 227 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 SCN9AQ15858 1988 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 MYO16Q9Y6X6 1858 aa2.28□□□□□ -2.04
TM9SF3-204ENST00000475401 CD109Q6YHK3 1445 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 A0A0J9YX75 114 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 A0A1B0GX51 115 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 TLCD2A6NGC4 264 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 ARL5CA6NH57 179 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 G3V3Q6 166 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 SLC22A1O15245 554 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 FAM107AO95990 144 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 CLPSP04118 112 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 NFYBP25208 207 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 FXYD2P54710 66 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 PABPC1L2AQ5JQF8 200 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 C1orf140Q5VVS0 124 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 DHFR2Q86XF0 187 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 BPIFA4PQ86YQ2 179 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 SIGLECL1Q8N7X8 197 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 C3orf56Q8N813 242 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 OR4C16Q8NGL9 310 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 MBD3L1Q8WWY6 194 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 BORCS5Q969J3 196 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 OSTCQ9NRP0 149 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 MRPL16Q9NX20 251 aaKnown RBP2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 SPANXCQ9NY87 97 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
TM9SF3-204ENST00000475401 XIRP1Q702N8 1843 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 ARHGEF28Q8N1W1 1705 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 MUC21A0A0G2JKD1 596 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 TRBV10-2A0A0K0K1G8 114 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 MUC21A0A140T8X8 626 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 TRDV1A0A1B0GX56 115 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 C1orf196B1AJZ1 125 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 H7C2G1 150 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 M0QZK8 103 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 GGCTO75223 188 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 BCL2P10415 239 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 FKBP2P26885 142 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 EIF5AP63241 154 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 PSG9Q00887 426 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 PLCXD2Q0VAA5 305 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 RTL8BQ17RB0 113 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 PHF5AQ7RTV0 110 aaKnown RBP2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 OR4D11Q8NGI4 311 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 ISOC1Q96CN7 298 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 CKLFQ9UBR5 152 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 EPDR1Q9UM22 224 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 HHLA3Q9XRX5 114 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 LAMTOR2Q9Y2Q5 125 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 MED31Q9Y3C7 131 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 CAMSAP2Q08AD1 1489 aa2.26□□□□□ -2.05
TM9SF3-204ENST00000475401 DOCK4Q8N1I0 1966 aa2.25□□□□□ -2.05
TM9SF3-204ENST00000475401 MALRD1Q5VYJ5 2156 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms