RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 CCL11P51671 97 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 LINC00322Q6ZN03 302 aaPredicted RBP11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 DSCAML1Q8TD84 2053 aa11.13□□□□□ -0.63
SEMA4D-217ENST00000475255 OR2T8A6NH00 312 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 C2orf70A6NJV1 201 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 UPK2O00526 184 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 COX7A2P2O60397 106 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 MOSP00540 346 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 TNFSF4P23510 183 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PRCDQ00LT1 54 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 TBR1Q16650 682 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 SSX8Q7RTT4 187 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 IGHV2-26A0A0B4J1V2 119 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 OR4C46A6NHA9 309 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 M0R1B8 84 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PSG1P11464 419 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 ORM2P19652 201 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PRB3Q04118 309 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 CORO2AQ92828 525 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PAXXQ9BUH6 204 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 KBTBD11-OT1A0A1B0GTJ5 212 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 A0A1W2PRE2 83 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PEX7O00628 323 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 WT1P19544 449 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 PGLYRP4Q96LB8 373 aa11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 FNDC4Q9H6D8 234 aaPredicted RBP11.12□□□□□ -0.63
SEMA4D-217ENST00000475255 FOXE3Q13461 319 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 ZCCHC24Q8N2G6 241 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 OR8B3Q8NGG8 313 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 MBD6Q96DN6 1003 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 PRNDQ9UKY0 176 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 KIR2DS2P43631 304 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 CD69Q07108 199 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 PEAR1Q5VY43 1037 aaPredicted RBP11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 ZNF329Q86UD4 541 aa11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 NAA38Q9BRA0 125 aaKnown RBP11.11□□□□□ -0.63
SEMA4D-217ENST00000475255 MUC21A0A0G2JKD1 596 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 MUC21A0A140T8X8 626 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 IGLC7A0M8Q6 106 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 CGB3P0DN86 165 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 CGB7P0DN87 165 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 MUC21Q5SSG8 566 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 MRPL20Q9BYC9 149 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 AMMECR1LQ6DCA0 310 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 HARBI1Q96MB7 349 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 ZPBPQ9BS86 351 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 COMMD5Q9GZQ3 224 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 SAP30LQ9HAJ7 183 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 A0A087X0K7 114 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 H0YJW9 148 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 NKX2-8O15522 239 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 C10orf113Q5VZT2 155 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 CLEC2AQ6UVW9 174 aa11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 MRPS16Q9Y3D3 137 aaKnown RBP11.1□□□□□ -0.63
SEMA4D-217ENST00000475255 CACNA1HO95180 2353 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 TRAV8-1A0A0A6YYK1 113 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 PGPA6NDG6 321 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 CCL3L1P16619 93 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 C21orf140B9A014 251 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 HCP5Q6MZN7 132 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 FER1L6-AS2Q96M78 137 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 TMEM70Q9BUB7 260 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 MRPL27Q9P0M9 148 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 PIEZO2Q9H5I5 2752 aa11.09□□□□□ -0.63
SEMA4D-217ENST00000475255 COL27A1Q8IZC6 1860 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 PSMB11A5LHX3 300 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 UQCRFS1P47985 274 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 LINC00305Q7Z4B0 112 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 TMEM178AQ8NBL3 297 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 OR1B1Q8NGR6 318 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 GAL3ST2Q9H3Q3 398 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 IGHV3-72A0A0B4J1Y9 119 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 APOA2P02652 100 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 RTL8BQ17RB0 113 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 COX19Q49B96 90 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 RPRMLQ8N4K4 120 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 TPSG1Q9NRR2 321 aa11.08□□□□□ -0.64
SEMA4D-217ENST00000475255 IGHV1-69-2A0A0G2JMI3 117 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 TOMM40O96008 361 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 DLX1P56177 255 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 TMEM95Q3KNT9 176 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 C2orf83Q53S99 150 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 FAM120AOSQ5T036 256 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 C1orf210Q8IVY1 113 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 MUC15Q8N387 334 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 RBMXL3Q8N7X1 1067 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 FDCSPQ8NFU4 85 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 GTSF1Q8WW33 167 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 FXYD5Q96DB9 178 aa11.07□□□□□ -0.64
SEMA4D-217ENST00000475255 ZZEF1O43149 2961 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms