RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 TEX38Q6PEX7 206 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM182Q6ZP80 229 aaPredicted RBP9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM217Q8N7C4 229 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF439Q8NDP4 499 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR10V1Q8NGI7 309 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR4A4PQ8NGN8 299 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR2T10Q8NGZ9 312 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 VN1R17PQ8TDU5 208 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 ST6GALNAC6Q969X2 333 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 ABRACLQ9P1F3 81 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 ERG28Q9UKR5 140 aa9.13□□□□□ -0.95
HLA-DOB-208ENST00000475235 A0A087WWC5 75 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 SNRPGP15A8MWD9 76 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 A8MZ25 164 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 PGAM2P15259 253 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 BLVRBP30043 206 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 CAV2P51636 162 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 CT45A1Q5HYN5 189 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 LY6G6FQ5SQ64 297 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 CD200R1LQ6Q8B3 271 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 MOB1BQ7L9L4 216 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 C6orf201Q7Z4U5 140 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 LFNGQ8NES3 379 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 CT45A3Q8NHU0 189 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR10C1Q96KK4 312 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 SPAG8Q99932 426 aaPredicted RBP9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 LPAR5Q9H1C0 372 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 TAS2R8Q9NYW2 309 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 HSPB8Q9UJY1 196 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 V9GY05 133 aa9.12□□□□□ -0.95
HLA-DOB-208ENST00000475235 C7orf77A4D0Y5 90 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 YPEL1O60688 119 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 ORM1P02763 201 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 C8orf88P0DMB2 117 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF134P52741 427 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 S100A10P60903 97 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 FOXE3Q13461 319 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR2F1Q13607 317 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 MEF2DQ14814 521 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM183BQ1AE95 376 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 LCNL1Q6ZST4 164 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 FER1L6-AS1Q8NA97 138 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR1N2Q8NGR9 330 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 GFI1Q99684 422 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 ABHD14AQ9BUJ0 271 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 NDUFB11Q9NX14 153 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 SLC45A2Q9UMX9 530 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 TNFSF18Q9UNG2 199 aa9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 MRPS16Q9Y3D3 137 aaKnown RBP9.11□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGHV3-72A0A0B4J1Y9 119 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 TCRBV4S1A1TA0A5B7 111 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 GAGE12BA1L429 117 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 RNF222A6NCQ9 220 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SH2D7A6NKC9 451 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 NCBP2LA6PVI3 153 aaKnown RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 J3QR89 54 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 NAPSAO96009 420 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 MOSP00540 346 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 IL5P05113 134 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SNCAP37840 140 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 RPS10P46783 165 aaKnown RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 GNMTQ14749 295 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SRSF7Q16629 238 aaKnown RBP eCLIP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 Q8N6K4 173 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SLC25A46Q96AG3 418 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 FAM3DQ96BQ1 224 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 ACY3Q96HD9 319 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 CIB3Q96Q77 187 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 KCNK15Q9H427 330 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 LIN7CQ9NUP9 197 aaKnown RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 PIPOXQ9P0Z9 390 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 A0A0A6YYD4 124 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 TRBV6-6A0A0A6YYG2 114 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 TRAV1-2A0A0B4J238 106 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 TRDV1A0A1B0GX56 115 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 ADARB2-AS1A8MUL3 147 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 IGHG2P01859 326 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 FCGR2BP31994 310 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 PPP1CCP36873 323 aaKnown RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SLC35B1P78383 322 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 SSX1Q16384 188 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 CD300EQ496F6 205 aaPredicted RBP9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 ZNF880Q6PDB4 577 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR5B3Q8NH48 314 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 OCC1Q8TAD7 63 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
HLA-DOB-208ENST00000475235 CMYA5Q8N3K9 4069 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 SOCS1O15524 211 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 GNG4P50150 75 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 SRPXP78539 464 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 NEGR1Q7Z3B1 354 aa9.09□□□□□ -0.95
HLA-DOB-208ENST00000475235 OR8I2Q8N0Y5 310 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms