RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 KIR2DL5AQ8N109 375 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 SLC24A4Q8NFF2 622 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 KIR2DL5BQ8NHK3 375 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 TMEM170AQ8WVE7 144 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 TP53TG1Q9Y2A0 90 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 V9GYH0 126 aa9.05□□□□□ -0.96
SSR1-205ENST00000475213 AGRNO00468 2067 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 DNAH1Q9P2D7 4330 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 TRAV30A0A087WSZ9 112 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 A0A0B4J2A0 478 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 SPRY2O43597 315 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 SCGB2A1O75556 95 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 NPPCP23582 126 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 FAUP35544 74 aaKnown RBP9.04□□□□□ -0.96
SSR1-205ENST00000475213 CCR6P51684 374 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 CMC4P56277 68 aaPredicted RBP9.04□□□□□ -0.96
SSR1-205ENST00000475213 ZNF79Q15937 498 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 TIGITQ495A1 244 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 PRSS54Q6PEW0 395 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 TOMM5Q8N4H5 51 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 STPG3Q8N7X2 389 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 RNASEH2CQ8TDP1 164 aaKnown RBP9.04□□□□□ -0.96
SSR1-205ENST00000475213 METTL26Q96S19 204 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 RBM38Q9H0Z9 239 aaKnown RBP9.04□□□□□ -0.96
SSR1-205ENST00000475213 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 MAP6D1Q9H9H5 199 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 CACFD1Q9UGQ2 172 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 SHPKQ9UHJ6 478 aa9.04□□□□□ -0.96
SSR1-205ENST00000475213 A0A1W2PS18 150 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 DNASE2O00115 360 aaPredicted RBP9.03□□□□□ -0.96
SSR1-205ENST00000475213 IGLC1P0CG04 106 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 SLC25A4P12235 298 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 ANXA3P12429 323 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 NPY1RP25929 384 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 CRYBB3P26998 211 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 S100A5P33763 92 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 RND2P52198 227 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 AP3S2P59780 193 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 RPL11P62913 178 aaKnown RBP9.03□□□□□ -0.96
SSR1-205ENST00000475213 TNFRSF9Q07011 255 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 SMCO1Q147U7 214 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 LGI3Q8N145 548 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 OR1S2Q8NGQ3 325 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 RNF183Q96D59 192 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 TMEM231Q9H6L2 316 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 HSPB7Q9UBY9 170 aa9.03□□□□□ -0.96
SSR1-205ENST00000475213 PLECQ15149 4684 aaKnown RBP9.02□□□□□ -0.96
SSR1-205ENST00000475213 TRAV2A0A0B4J234 112 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 A0A0J9YWU9 116 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 OR10J1P30954 320 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 SRPXP78539 464 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 TMEM128Q5BJH2 165 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 ETFRF1Q6IPR1 90 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 TMED4Q7Z7H5 227 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 LYG2Q86SG7 212 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 CCDC190Q86UF4 302 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 NOXA1Q86UR1 476 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 FAM24BQ8N5W8 94 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 DTD1Q8TEA8 209 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 RBKSQ9H477 322 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 U3KQ87 197 aa9.02□□□□□ -0.97
SSR1-205ENST00000475213 IFNA10P01566 189 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 P2RY1P47900 373 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 DEFB131AP59861 70 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 YPEL3P61236 119 aaPredicted RBP9.01□□□□□ -0.97
SSR1-205ENST00000475213 EWSR1Q01844 656 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSR1-205ENST00000475213 RBMS2Q15434 407 aaKnown RBP9.01□□□□□ -0.97
SSR1-205ENST00000475213 XP32Q5T750 250 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 Q8WTZ3 238 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 DEDD2Q8WXF8 326 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 CSTL1Q9H114 145 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 RABAC1Q9UI14 185 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 U3KQE9 123 aa9.01□□□□□ -0.97
SSR1-205ENST00000475213 DUXBA0A1W2PPF3 345 aa9□□□□□ -0.97
SSR1-205ENST00000475213 MPTX1A8MV57 137 aa9□□□□□ -0.97
SSR1-205ENST00000475213 ZNF701M0R085 212 aaPredicted RBP9□□□□□ -0.97
SSR1-205ENST00000475213 LEMD1Q68G75 181 aa9□□□□□ -0.97
SSR1-205ENST00000475213 STXBP6Q8NFX7 210 aa9□□□□□ -0.97
SSR1-205ENST00000475213 OR1S1Q8NH92 325 aa9□□□□□ -0.97
SSR1-205ENST00000475213 NPIPB3Q92617 1050 aa9□□□□□ -0.97
SSR1-205ENST00000475213 ACY3Q96HD9 319 aa9□□□□□ -0.97
SSR1-205ENST00000475213 NARS2Q96I59 477 aaKnown RBP9□□□□□ -0.97
SSR1-205ENST00000475213 SLC25A21Q9BQT8 299 aaPredicted RBP9□□□□□ -0.97
SSR1-205ENST00000475213 PIGBOS1A0A0B4J2F0 54 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 K7EQG2 157 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 PITX3O75364 302 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 IL4P05112 153 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 HNRNPCP07910 306 aaKnown RBP eCLIP8.99□□□□□ -0.971e-6■■□□□ 12.6
SSR1-205ENST00000475213 VAMP1P23763 118 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 USF2Q15853 346 aaPredicted RBP8.99□□□□□ -0.97
SSR1-205ENST00000475213 SPANXN2Q5MJ10 180 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 LRTM2Q8N967 370 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 GRAMD2BQ96HH9 432 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 SRRQ9GZT4 340 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 HYDINQ4G0P3 5121 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
SSR1-205ENST00000475213 JTBO76095 146 aa8.98□□□□□ -0.97
SSR1-205ENST00000475213 SFT2D2O95562 160 aa8.98□□□□□ -0.97
SSR1-205ENST00000475213 TOMM40O96008 361 aa8.98□□□□□ -0.97
SSR1-205ENST00000475213 IFNA4P05014 189 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms