RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 TGOLN2O43493 480 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 TRBV12-3P01733 135 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 FRMD6-AS1P0C7T7 363 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 GPX4P36969 197 aaPredicted RBP9.02□□□□□ -0.97
CLIP2-204ENST00000474962 H2BFSP57053 126 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 KLF5Q13887 457 aaPredicted RBP9.02□□□□□ -0.97
CLIP2-204ENST00000474962 PVRIGQ6DKI7 326 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 OR8G2PQ6IF36 304 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 IL34Q6ZMJ4 242 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 Q8N1Y9 231 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 OR10P1Q8NGE3 313 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 PPP1R1CQ8WVI7 109 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 ACY3Q96HD9 319 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 CCDC140Q96MF4 163 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 ELOVL1Q9BW60 279 aa9.02□□□□□ -0.97
CLIP2-204ENST00000474962 ZNF436Q9C0F3 470 aaPredicted RBP9.02□□□□□ -0.97
CLIP2-204ENST00000474962 ZNF320A2RRD8 509 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 E5RGE8 158 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 BMPR1BO00238 502 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 DEDDO75618 318 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 SCAF4O95104 1147 aaKnown RBP9.01□□□□□ -0.97
CLIP2-204ENST00000474962 OR2C1O95371 312 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 METTL15P1P0C7V9 234 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 CXCL3P19876 107 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 FCGR2BP31994 310 aaPredicted RBP9.01□□□□□ -0.97
CLIP2-204ENST00000474962 SYNJ2BPP57105 145 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 RELQ04864 619 aaPredicted RBP9.01□□□□□ -0.97
CLIP2-204ENST00000474962 FGL1Q08830 312 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 IL15RAQ13261 267 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 MLANAQ16655 118 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 SLC16A13Q7RTY0 426 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 STX12Q86Y82 276 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 OR4X1Q8NH49 305 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 THAP6Q8TBB0 222 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM170AQ8WVE7 144 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 ASB13Q8WXK3 278 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 FNDC4Q9H6D8 234 aaPredicted RBP9.01□□□□□ -0.97
CLIP2-204ENST00000474962 PEMTQ9UBM1 199 aa9.01□□□□□ -0.97
CLIP2-204ENST00000474962 TENM2Q9NT68 2774 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 SMCO3A2RU48 225 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 CLN5O75503 358 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 YIF1AO95070 293 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 MPC2O95563 127 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM50AO95807 157 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 IGLV1-51P01701 117 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 RND2P52198 227 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 PAX9P55771 341 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 PRSS54Q6PEW0 395 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 OR11H7Q8NGC8 314 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 RCHY1Q96PM5 261 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 SLC25A31Q9H0C2 315 aa9□□□□□ -0.97
CLIP2-204ENST00000474962 IGHV3-35A0A0C4DH35 117 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 FAM24AA6NFZ4 105 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 ZFP92A6NM28 416 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 FABP1P07148 127 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 CTSGP08311 255 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
CLIP2-204ENST00000474962 OR10J1P30954 320 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 NUP62P37198 522 aaPredicted RBP8.99□□□□□ -0.97
CLIP2-204ENST00000474962 P2RY1P47900 373 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 HBG1P69891 147 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 HBG2P69892 147 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 AKR1C1Q04828 323 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM14EPQ6UXP3 125 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 GPHB5Q86YW7 130 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 OR9G4Q8NGQ1 327 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 OR1S2Q8NGQ3 325 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 NPIPB3Q92617 1050 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 CHRDL1Q9BU40 450 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 LYRM2Q9NU23 88 aaPredicted RBP8.99□□□□□ -0.97
CLIP2-204ENST00000474962 CSMD3Q7Z407 3707 aa8.99□□□□□ -0.97
CLIP2-204ENST00000474962 NDUFA4O00483 81 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 CST7O76096 145 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 CSN3P07498 182 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 IGHV4-30-4P0DP06 118 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 SULT1A1P50225 295 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 RAP2BP61225 183 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 GAMTQ14353 236 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 LILRB2Q8N423 598 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM217Q8N7C4 229 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM116Q8NCL8 245 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 C20orf24Q9BUV8 137 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 UFC1Q9Y3C8 167 aa8.98□□□□□ -0.97
CLIP2-204ENST00000474962 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 F8W735 103 aaPredicted RBP8.97□□□□□ -0.97
CLIP2-204ENST00000474962 C3orf84H3BNL1 204 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 S100A11P31949 105 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 DLK1P80370 383 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 SLC38A11Q08AI6 406 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 TIGITQ495A1 244 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 ZNF600Q6ZNG1 722 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 Q6ZNX1 250 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 ACOT7LQ6ZUV0 252 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 LINC00528Q8N1L1 170 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 TMEM252Q8N6L7 170 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 Q8WTZ3 238 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 WDR89Q96FK6 387 aaPredicted RBP8.97□□□□□ -0.97
CLIP2-204ENST00000474962 GINS3Q9BRX5 216 aa8.97□□□□□ -0.97
CLIP2-204ENST00000474962 GGACTQ9BVM4 153 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms