RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 SACSQ9NZJ4 4579 aa5.15□□□□□ -1.59
VPS50-211ENST00000474412 IGHV3OR16-13A0A075B7E8 117 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 IGHV3-74A0A0B4J1X5 117 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 GABARAPH6UMI1 98 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 I3L2K1 104 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 ST8SIA3O43173 380 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 TPPPO94811 219 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 RAB3DO95716 219 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 MT-CO2P00403 227 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 C8orf88P0DMB2 117 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 UCP1P25874 307 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 TAS2R19P59542 299 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 IL18Q14116 193 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 Q56UQ5 140 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 STEAP1BQ6NZ63 245 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 ARRDC1Q8N5I2 433 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 TMEM229BQ8NBD8 167 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 ZNF114Q8NC26 417 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 OR52B4Q8NGK2 314 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 OR5B3Q8NH48 314 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 VN1R17PQ8TDU5 208 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 TMEM230Q96A57 120 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 ISOC1Q96CN7 298 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 C20orf24Q9BUV8 137 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 C1QTNF4Q9BXJ3 329 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 SLIRPQ9GZT3 109 aaKnown RBP5.14□□□□□ -1.59
VPS50-211ENST00000474412 C6orf62Q9GZU0 229 aaPredicted RBP5.14□□□□□ -1.59
VPS50-211ENST00000474412 C5orf66Q9H5L9 145 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 TUBA4BQ9H853 241 aa5.14□□□□□ -1.59
VPS50-211ENST00000474412 CCDC59Q9P031 241 aaKnown RBP5.14□□□□□ -1.59
VPS50-211ENST00000474412 IGKV3-7A0A075B6H7 116 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 A0A0B4J293 547 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 C3orf85A0A1B0GTC6 90 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 C3orf84H3BNL1 204 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 IFNA6P05013 189 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 CTSGP08311 255 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 RNASE2P10153 161 aaKnown RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 EWSR1Q01844 656 aaKnown RBP eCLIP5.13□□□□□ -1.59
VPS50-211ENST00000474412 MEF2DQ14814 521 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 TRIM16LQ309B1 348 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 FAM106AQ4KMX7 169 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 LPCAT3Q6P1A2 487 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 HSD17B13Q7Z5P4 300 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 SLC35G3Q8N808 338 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 OR1P1Q8NH06 330 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 OR4A16Q8NH70 328 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 RAB2BQ8WUD1 216 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 BSCL2Q96G97 398 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 ZNF486Q96H40 463 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 DIRAS2Q96HU8 199 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 TMEM56Q96MV1 263 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 TSC22D3Q99576 134 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 RTBDNQ9BSG5 229 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 FNDC4Q9H6D8 234 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 FAM212BQ9NTI7 297 aaPredicted RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 SLC2A8Q9NY64 477 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 TECRQ9NZ01 308 aaKnown RBP5.13□□□□□ -1.59
VPS50-211ENST00000474412 COPZ2Q9P299 210 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 TENM2Q9NT68 2774 aa5.13□□□□□ -1.59
VPS50-211ENST00000474412 HYDINQ4G0P3 5121 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 IGHV3-66A0A0C4DH42 116 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 A0A1B0GU03 582 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 ANKRD20A5PA0PJZ0 165 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 NDUFA4O00483 81 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 NUPL2O15504 423 aaKnown RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 APOHP02749 345 aaPredicted RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 CTSDP07339 412 aaPredicted RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 TBPP20226 339 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 S100GP29377 79 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 ETV6P41212 452 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 HOXA1P49639 335 aaPredicted RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 ERVFC1-1P60608 527 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 HSPE1P61604 102 aaKnown RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 ZNF79Q15937 498 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 FAM24BQ8N5W8 94 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 OR51S1Q8NGJ8 323 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 OR1L6Q8NGR2 347 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 TERB2Q8NHR7 220 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 GLYATL2Q8WU03 294 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 RNF2Q99496 336 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 TMEM222Q9H0R3 208 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 NAA60Q9H7X0 242 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 PALMDQ9NP74 551 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 DAZ1Q9NQZ3 744 aaKnown RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 THYN1Q9P016 225 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 MRPL27Q9P0M9 148 aaKnown RBP5.12□□□□□ -1.59
VPS50-211ENST00000474412 UFC1Q9Y3C8 167 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 V9GYH0 126 aa5.12□□□□□ -1.59
VPS50-211ENST00000474412 ALMS1Q8TCU4 4167 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 IGHV7-4-1A0A0J9YVY3 117 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 CRYM-AS1A6NIL9 109 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 CTDSPLO15194 276 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 GNG7O60262 68 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 AKAIN1P0CW23 69 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 FCGR2BP31994 310 aaPredicted RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 TFPI2P48307 235 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 TMBIM6P55061 237 aa5.11□□□□□ -1.59
VPS50-211ENST00000474412 SUPT4H1P63272 117 aaKnown RBP5.11□□□□□ -1.59
VPS50-211ENST00000474412 DEFB135Q30KP9 77 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms