RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ARL3P36405 182 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 RAB31Q13636 194 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 LGALSLQ3ZCW2 172 aaPredicted RBP6.46□□□□□ -1.38
CNN3-205ENST00000474409 TCTEX1D4Q5JR98 221 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 RPL7L1Q6DKI1 246 aaKnown RBP6.46□□□□□ -1.38
CNN3-205ENST00000474409 HIST2H2BDQ6DRA6 164 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 ZNF343Q6P1L6 599 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 TREML4Q6UXN2 200 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 TMEM144Q7Z5S9 345 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 HSD17B11Q8NBQ5 300 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 TMEM116Q8NCL8 245 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 C4orf3Q8WVX3 66 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 TXN2Q99757 166 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 CITED2Q99967 270 aaPredicted RBP6.46□□□□□ -1.38
CNN3-205ENST00000474409 WDR61Q9GZS3 305 aaKnown RBP6.46□□□□□ -1.38
CNN3-205ENST00000474409 WFDC1Q9HC57 220 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 KCNIP2Q9NS61 270 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 WDR83OSQ9Y284 106 aa6.46□□□□□ -1.38
CNN3-205ENST00000474409 NIPBLQ6KC79 2804 aaeCLIP6.46□□□□□ -1.38
CNN3-205ENST00000474409 C17orf112F2Z3M2 114 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 TGOLN2O43493 480 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 JTBO76095 146 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 TRBV12-3P01733 135 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 CLEC3BP05452 202 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 IGLC1P0CG04 106 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 CDX1P47902 265 aaPredicted RBP6.45□□□□□ -1.38
CNN3-205ENST00000474409 CAMLGP49069 296 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 EIF5AP63241 154 aaKnown RBP6.45□□□□□ -1.38
CNN3-205ENST00000474409 RUNX1Q01196 453 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 OPCMLQ14982 345 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 DEFB136Q30KP8 78 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 TIGITQ495A1 244 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 SPSB3Q6PJ21 355 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 BTNL8Q6UX41 500 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 C8orf86Q6ZUL3 223 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 ZNF709Q8N972 641 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 ATP6V0BQ99437 205 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 MGST2Q99735 147 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 RSG1Q9BU20 258 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 NPCDR1Q9BY65 106 aa6.45□□□□□ -1.38
CNN3-205ENST00000474409 PARD6GQ9BYG4 376 aaPredicted RBP6.45□□□□□ -1.38
CNN3-205ENST00000474409 PEF1Q9UBV8 284 aaKnown RBP6.45□□□□□ -1.38
CNN3-205ENST00000474409 IGKV1OR2-108A0A075B7D4 117 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 F8W735 103 aaPredicted RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 AGPAT2O15120 278 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 GGCTO75223 188 aaKnown RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 TPT1P13693 172 aaKnown RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 RELQ04864 619 aaPredicted RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 ZNF616Q08AN1 781 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 KIAA0141Q14154 515 aaPredicted RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 RPEL1Q2QD12 228 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 LAMTOR1Q6IAA8 161 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 CYP2G1PQ6ZSU1 146 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 C18orf65Q6ZTR6 163 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 SLC51BQ86UW2 128 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 NDUFA11Q86Y39 141 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 BPIFCQ8NFQ6 507 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 DPF1Q92782 380 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 TRGV9Q99603 122 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 CHRDL1Q9BU40 450 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 GGTLC1Q9BX51 225 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 CYTL1Q9NRR1 136 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 BOLA1Q9Y3E2 137 aa6.44□□□□□ -1.38
CNN3-205ENST00000474409 LSM4Q9Y4Z0 139 aaKnown RBP6.44□□□□□ -1.38
CNN3-205ENST00000474409 IGKV1D-37A0A075B6S9 117 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 IGHV4OR15-8A0A075B7B6 117 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 A0A087WW49 117 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 IGHV3-35A0A0C4DH35 117 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 LINC01619G3V211 115 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 BMPR1BO00238 502 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 YIF1AO95070 293 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 TOMM40O96008 361 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 HSPB1P04792 205 aaKnown RBP6.43□□□□□ -1.38
CNN3-205ENST00000474409 CTSGP08311 255 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ZP3P21754 424 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ATP6V0CP27449 155 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ELLP55199 621 aaPredicted RBP6.43□□□□□ -1.38
CNN3-205ENST00000474409 RIPPLY3P57055 190 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 KRTAP10-3P60369 221 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 LYZP61626 148 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 B2MP61769 119 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 SELENOTP62341 195 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ZNF90Q03938 601 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 MIC13Q5XKP0 118 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ZNF600Q6ZNG1 722 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 STPG3Q8N7X2 389 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 C3orf56Q8N813 242 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 OR11H1Q8NG94 326 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 STOML3Q8TAV4 291 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ST8SIA2Q92186 375 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
CNN3-205ENST00000474409 PSMG3Q9BT73 122 aaPredicted RBP6.43□□□□□ -1.38
CNN3-205ENST00000474409 SH3BGRL3Q9H299 93 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 TIMM9Q9Y5J7 89 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 PXMP4Q9Y6I8 212 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 ATRQ13535 2644 aa6.43□□□□□ -1.38
CNN3-205ENST00000474409 I3L521 148 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms