RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 BRI3O95415 125 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 IGHV3-23P01764 117 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 PPIFP30405 207 aaKnown RBP8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 GPR183P32249 361 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 RPL29P47914 159 aaKnown RBP8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 RAB9AP51151 201 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 BLOC1S1P78537 153 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 DEFA5Q01523 94 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 RELQ04864 619 aaPredicted RBP8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 MLANAQ16655 118 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 TMEM41BQ5BJD5 291 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 SPSB3Q6PJ21 355 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 KLHDC1Q8N7A1 406 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 STPG3Q8N7X2 389 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 THAP8Q8NA92 274 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 FAM213BQ8TBF2 198 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 Q8WTZ3 238 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 ATP6V0BQ99437 205 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 PFDN5Q99471 154 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 MGST2Q99735 147 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 GGTLC1Q9BX51 225 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 ARV1Q9H2C2 271 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 PFDN2Q9UHV9 154 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 S4R3C0 116 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 OTOGQ6ZRI0 2925 aa8.03□□□□□ -1.12
PRPF38A-202ENST00000474048 A0A1B0GUS0 222 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 NUDT19A8MXV4 375 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 YIF1AO95070 293 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 IGLV1-40P01703 118 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 LINC00869P0C866 280 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 RD3LP0DJH9 198 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 M6PRP20645 277 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 ARL3P36405 182 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 LYZP61626 148 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 C19orf54Q5BKX5 351 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 FAM74A1Q5RGS3 127 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 PXDC1Q5TGL8 231 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 CLEC19AQ6UXS0 136 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 DPPA3Q6W0C5 159 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 OR5AU1Q8NGC0 362 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 NARS2Q96I59 477 aaKnown RBP8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 RNF2Q99496 336 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 PBDC1Q9BVG4 233 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 C16orf95Q9H693 158 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 SLC39A9Q9NUM3 307 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 RNF24Q9Y225 148 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 DMRT1Q9Y5R6 373 aa8.02□□□□□ -1.13
PRPF38A-202ENST00000474048 TGOLN2O43493 480 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 IGHV3-11P01762 117 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 HBE1P02100 147 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR5G3P0C626 314 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 IGLC1P0CG04 106 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 PSMB8P28062 276 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 FCGR2BP31994 310 aaPredicted RBP8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 SULT1A2P50226 295 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 RHOBP62745 196 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 CFHR3Q02985 330 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 TIGITQ495A1 244 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 MIC13Q5XKP0 118 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 IQCF2Q8IXL9 164 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR51G1Q8NGK1 321 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 OR1B1Q8NGR6 318 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 ZNF502Q8TBZ5 544 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 C19orf24Q9BVV8 132 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 SERTAD4Q9NUC0 356 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 LSM4Q9Y4Z0 139 aaKnown RBP8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 RNF114Q9Y508 228 aa8.01□□□□□ -1.13
PRPF38A-202ENST00000474048 ELOA3CA0A087WX78 387 aaPredicted RBP8□□□□□ -1.13
PRPF38A-202ENST00000474048 ANKRD34BA5PLL1 514 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 BMPR1BO00238 502 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 RGS13O14921 159 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 TOMM40O96008 361 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 CLEC3BP05452 202 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 ORM2P19652 201 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
PRPF38A-202ENST00000474048 TAS2R45P59539 299 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 YPEL3P61236 119 aaPredicted RBP8□□□□□ -1.13
PRPF38A-202ENST00000474048 KLK9Q2XQG4 91 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 C10orf113Q5VZT2 155 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 FAM122CQ6P4D5 195 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 ZNF600Q6ZNG1 722 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 SAT2Q96F10 170 aaPredicted RBP8□□□□□ -1.13
PRPF38A-202ENST00000474048 DOK5Q9P104 306 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 KLK9Q9UKQ9 250 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 SLC45A2Q9UMX9 530 aa8□□□□□ -1.13
PRPF38A-202ENST00000474048 CLPSL1A2RUU4 121 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 CYSRT1A8MQ03 144 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 HYPMO75409 117 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 IL4P05112 153 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 RPLP1P05386 114 aaKnown RBP7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 H2AFB1P0C5Y9 115 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 MDKP21741 143 aaPredicted RBP7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 ZNF90Q03938 601 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 FOXL1Q12952 345 aa7.99□□□□□ -1.13
PRPF38A-202ENST00000474048 RPEL1Q2QD12 228 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms