RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PAXXQ9BUH6 204 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PDCD10Q9BUL8 212 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF471Q9BX82 626 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 SMIM3Q9BZL3 60 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 BCL2L14Q9BZR8 327 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 NMES1Q9C002 83 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MFFQ9GZY8 342 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TOLLIPQ9H0E2 274 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM222Q9H0R3 208 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 OR2D2Q9H210 308 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 ARV1Q9H2C2 271 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 PRORYQ9H606 182 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 NARFLQ9H6Q4 476 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TAF9BQ9HBM6 251 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 UFSP2Q9NUQ7 469 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM100Q9NV29 134 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C1orf123Q9NWV4 160 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 CALYQ9NYX4 217 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TECRQ9NZ01 308 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TREM2Q9NZC2 230 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TAAR3PQ9P1P4 343 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 C14orf166Q9Y224 244 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 POLDIP2Q9Y2S7 368 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 RNF115Q9Y4L5 304 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 LSM5Q9Y4Y9 91 aaKnown RBP1.03□□□□□ -2.24
CCDC39-203ENST00000473854 MAB21L2Q9Y586 359 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM56-RWDD3S4R434 201 aa1.03□□□□□ -2.24
CCDC39-203ENST00000473854 TNXBP22105 4242 aa1.03□□□□□ -2.25
CCDC39-203ENST00000473854 RYR1P21817 5038 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV2-28A0A075B6P5 120 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 A0A0D9SG52 128 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 UBE2L5PA0A1B0GUS4 154 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1B0GW64 132 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 A0A1W2PPE3 182 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DUXBA0A1W2PPF3 345 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 FAM24AA6NFZ4 105 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 FAM74A7A6NL05 159 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DEFB108AA8MXU0 73 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C9JQL5 133 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LYNX1G3V0Z9 82 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 C19orf84I3L1E1 186 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 K7N7A8 449 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DNASE2O00115 360 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 WRBO00258 174 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CCL21O00585 134 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PPIHO43447 177 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MED6O75586 246 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PGLYRP1O75594 196 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CST7O76096 145 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LY6HO94772 140 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CDS2O95674 445 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TGP01266 2768 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IFNA7P01567 189 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV1D-33P01593 117 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV1-33P01594 117 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV2D-28P01615 120 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 IGHV3-7P01780 117 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GYPAP02724 150 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GAPDHP04406 335 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GLAP06280 429 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CD55P08174 381 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR4A8P0C604 315 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OR8U9P0C7N5 309 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 METTL15P1P0C7V9 234 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SAA2P0DJI9 122 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CGB3P0DN86 165 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CGB7P0DN87 165 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 LYNX1P0DP58 116 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DEFA4P12838 97 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TPT1P13693 172 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 MUC1P15941 1255 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CCL3L1P16619 93 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 M6PRP20645 277 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 S100A1P23297 94 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 OMGP23515 440 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 F2RP25116 425 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PAX6P26367 422 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ATP6V0CP27449 155 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RPL12P30050 165 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 PRDX2P32119 198 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 G6PCP35575 357 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CEACAM6P40199 344 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GABRA2P47869 451 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 P2RY1P47900 373 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GNG10P50151 68 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 SULT1A2P50226 295 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 AKR1C2P52895 323 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DLX6P56179 175 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM33P57088 247 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 RPS23P62266 143 aaKnown RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 HERV-K104P63124 156 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 HTD2P86397 168 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 TNFAIP6P98066 277 aaPredicted RBP1.02□□□□□ -2.25
CCDC39-203ENST00000473854 AKR1C1Q04828 323 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 FGL1Q08830 312 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 DIAPH2-AS1Q14236 149 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 CLINT1Q14677 625 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF726P1Q15940 193 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 GUCA2BQ16661 112 aa1.02□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF674Q2M3X9 581 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms