RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 ELLP55199 621 aaPredicted RBP13.61□□□□□ -0.23
SNX4-204ENST00000473417 ATP5IP56385 69 aaPredicted RBP13.61□□□□□ -0.23
SNX4-204ENST00000473417 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 CD300EQ496F6 205 aaPredicted RBP13.61□□□□□ -0.23
SNX4-204ENST00000473417 SPANXN5Q5MJ07 72 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 ETFRF1Q6IPR1 90 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 OR2K2Q8NGT1 345 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 MUC7Q8TAX7 377 aa13.61□□□□□ -0.23
SNX4-204ENST00000473417 GPN1Q9HCN4 374 aaPredicted RBP13.61□□□□□ -0.23
SNX4-204ENST00000473417 DYNC2H1Q8NCM8 4307 aaKnown RBP13.6□□□□□ -0.23
SNX4-204ENST00000473417 H3BP45 60 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 SSSCA1O60232 199 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 RAB11AP62491 216 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 RPP30P78346 268 aaKnown RBP13.6□□□□□ -0.23
SNX4-204ENST00000473417 SLC16A13Q7RTY0 426 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 NPIPB3Q92617 1050 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 ACY3Q96HD9 319 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 MARVELD1Q9BSK0 173 aa13.6□□□□□ -0.23
SNX4-204ENST00000473417 DAZ1Q9NQZ3 744 aaKnown RBP13.6□□□□□ -0.23
SNX4-204ENST00000473417 TIGITQ495A1 244 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 GTSCR1Q86UQ5 136 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 MARC2Q969Z3 335 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 TECRQ9NZ01 308 aaKnown RBP13.59□□□□□ -0.23
SNX4-204ENST00000473417 PSENENQ9NZ42 101 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 MRPL27Q9P0M9 148 aaKnown RBP13.59□□□□□ -0.23
SNX4-204ENST00000473417 MLXQ9UH92 298 aa13.59□□□□□ -0.23
SNX4-204ENST00000473417 PUS1Q9Y606 427 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNX4-204ENST00000473417 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 K7EMT4 169 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 PRAF2O60831 178 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 SCGB2A1O75556 95 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 C8orf88P0DMB2 117 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 BTNL8Q6UX41 500 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 TOMM20LQ6UXN7 152 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 GSG1LQ6UXU4 331 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 C2orf50Q96LR7 162 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 CITED4Q96RK1 184 aa13.58□□□□□ -0.24
SNX4-204ENST00000473417 STRAPQ9Y3F4 350 aaKnown RBP13.58□□□□□ -0.24
SNX4-204ENST00000473417 IGHV3-49A0A0A0MS15 119 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 SNRPGP15A8MWD9 76 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 IGKV1-17P01599 117 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 MBPP02686 304 aaPredicted RBP13.57□□□□□ -0.24
SNX4-204ENST00000473417 IGLC1P0CG04 106 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 OR10J1P30954 320 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 GPX4P36969 197 aaPredicted RBP13.57□□□□□ -0.24
SNX4-204ENST00000473417 CASC10Q5T4H9 136 aa13.57□□□□□ -0.24
SNX4-204ENST00000473417 TENM2Q9NT68 2774 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 PAX9P55771 341 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 GAMTQ14353 236 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 GUCA2BQ16661 112 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 OR1S2Q8NGQ3 325 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 WDR89Q96FK6 387 aaPredicted RBP13.56□□□□□ -0.24
SNX4-204ENST00000473417 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 SMIM8Q96KF7 97 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 RAB40CQ96S21 281 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 ZFAND3Q9H8U3 227 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 RCL1Q9Y2P8 373 aaKnown RBP13.56□□□□□ -0.24
SNX4-204ENST00000473417 LSM5Q9Y4Y9 91 aaKnown RBP13.56□□□□□ -0.24
SNX4-204ENST00000473417 STARD9Q9P2P6 4700 aa13.56□□□□□ -0.24
SNX4-204ENST00000473417 TRAV14DV4A0A0A6YYC5 116 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 ZNF785A8K8V0 405 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 GOSR2O14653 212 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 HAGHQ16775 308 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 TMEM61Q8N0U2 210 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 LYSTQ99698 3801 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 SPATA25Q9BR10 227 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 GINS3Q9BRX5 216 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 SMPXQ9UHP9 88 aa13.55□□□□□ -0.24
SNX4-204ENST00000473417 IGHV3OR16-13A0A075B7E8 117 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 IGHV3-74A0A0B4J1X5 117 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 K7EPK0 472 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 SCAF4O95104 1147 aaKnown RBP13.54□□□□□ -0.24
SNX4-204ENST00000473417 SIX6O95475 246 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 Q8WTZ3 238 aa13.54□□□□□ -0.24
SNX4-204ENST00000473417 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 ZFP92A6NM28 416 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 L7N2F9 121 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 PTTG1O95997 202 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 CD81P60033 236 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 S100A10P60903 97 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
SNX4-204ENST00000473417 VAMP2P63027 116 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 RBPMS2Q6ZRY4 209 aaKnown RBP13.53□□□□□ -0.24
SNX4-204ENST00000473417 NEURL2Q9BR09 285 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 RHPN1-AS1Q9BWJ2 59 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 TUBA4BQ9H853 241 aa13.53□□□□□ -0.24
SNX4-204ENST00000473417 CHEK1O14757 476 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 SSNA1O43805 119 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 TSC22D2O75157 780 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 CCNKO75909 580 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
SNX4-204ENST00000473417 METTL15P1P0C7V9 234 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 LYL1P12980 280 aa13.52□□□□□ -0.25
SNX4-204ENST00000473417 TAS2R30P59541 319 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms