RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 TNFSF12O43508 249 aa2.55□□□□□ -2
XRN1-209ENST00000472625 DEDDO75618 318 aa2.55□□□□□ -2
XRN1-209ENST00000472625 B3GALNT1O75752 331 aa2.55□□□□□ -2
XRN1-209ENST00000472625 REG1AP05451 166 aa2.55□□□□□ -2
XRN1-209ENST00000472625 IGKV1-13P0DP09 117 aa2.55□□□□□ -2
XRN1-209ENST00000472625 EDN2P20800 178 aa2.55□□□□□ -2
XRN1-209ENST00000472625 S100A7P31151 101 aa2.55□□□□□ -2
XRN1-209ENST00000472625 SNCAP37840 140 aa2.55□□□□□ -2
XRN1-209ENST00000472625 FXYD4P59646 89 aa2.55□□□□□ -2
XRN1-209ENST00000472625 RPL30P62888 115 aaKnown RBP2.55□□□□□ -2
XRN1-209ENST00000472625 ERHP84090 104 aaKnown RBP2.55□□□□□ -2
XRN1-209ENST00000472625 EIF4EBP1Q13541 118 aaPredicted RBP2.55□□□□□ -2
XRN1-209ENST00000472625 LCE1EQ5T753 118 aa2.55□□□□□ -2
XRN1-209ENST00000472625 SFXN4Q6P4A7 337 aa2.55□□□□□ -2
XRN1-209ENST00000472625 ZNF600Q6ZNG1 722 aa2.55□□□□□ -2
XRN1-209ENST00000472625 ABCA13Q86UQ4 5058 aa2.55□□□□□ -2
XRN1-209ENST00000472625 TMEM17Q86X19 198 aa2.55□□□□□ -2
XRN1-209ENST00000472625 HOGA1Q86XE5 327 aa2.55□□□□□ -2
XRN1-209ENST00000472625 OR5AP2Q8NGF4 316 aa2.55□□□□□ -2
XRN1-209ENST00000472625 OR51H1Q8NH63 302 aa2.55□□□□□ -2
XRN1-209ENST00000472625 OR4A16Q8NH70 328 aa2.55□□□□□ -2
XRN1-209ENST00000472625 TMEM170AQ8WVE7 144 aa2.55□□□□□ -2
XRN1-209ENST00000472625 TMEM18Q96B42 140 aa2.55□□□□□ -2
XRN1-209ENST00000472625 RNF2Q99496 336 aa2.55□□□□□ -2
XRN1-209ENST00000472625 GFI1Q99684 422 aa2.55□□□□□ -2
XRN1-209ENST00000472625 HINT2Q9BX68 163 aa2.55□□□□□ -2
XRN1-209ENST00000472625 NXF2Q9GZY0 626 aaKnown RBP2.55□□□□□ -2
XRN1-209ENST00000472625 Q9H521 79 aa2.55□□□□□ -2
XRN1-209ENST00000472625 RNF167Q9H6Y7 350 aa2.55□□□□□ -2
XRN1-209ENST00000472625 ENY2Q9NPA8 101 aa2.55□□□□□ -2
XRN1-209ENST00000472625 NDUFA4L2Q9NRX3 87 aa2.55□□□□□ -2
XRN1-209ENST00000472625 TMEM14BQ9NUH8 114 aa2.55□□□□□ -2
XRN1-209ENST00000472625 TBC1D24Q9ULP9 559 aa2.55□□□□□ -2
XRN1-209ENST00000472625 SSR3Q9UNL2 185 aa2.55□□□□□ -2
XRN1-209ENST00000472625 IGHV4-4A0A075B6R2 117 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IGKV1D-8A0A087WSZ0 117 aa2.54□□□□□ -2
XRN1-209ENST00000472625 TRAV30A0A087WSZ9 112 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IGHV4-28A0A0C4DH34 117 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IGHV3-35A0A0C4DH35 117 aa2.54□□□□□ -2
XRN1-209ENST00000472625 A0A1B0GW64 132 aa2.54□□□□□ -2
XRN1-209ENST00000472625 SMIM9A6NGZ8 99 aa2.54□□□□□ -2
XRN1-209ENST00000472625 ZNF705EA8MWA4 302 aaPredicted RBP2.54□□□□□ -2
XRN1-209ENST00000472625 J3QRK9 145 aa2.54□□□□□ -2
XRN1-209ENST00000472625 K7EIM0 57 aa2.54□□□□□ -2
XRN1-209ENST00000472625 GPR31O00270 319 aa2.54□□□□□ -2
XRN1-209ENST00000472625 S1PR2O95136 353 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IFNA10P01566 189 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IFNA21P01568 189 aa2.54□□□□□ -2
XRN1-209ENST00000472625 IFNA17P01571 189 aa2.54□□□□□ -2
XRN1-209ENST00000472625 RLN1P04808 185 aa2.54□□□□□ -2
XRN1-209ENST00000472625 CTSGP08311 255 aa2.54□□□□□ -2
XRN1-209ENST00000472625 NPPCP23582 126 aa2.54□□□□□ -2
XRN1-209ENST00000472625 PSMB9P28065 219 aa2.54□□□□□ -2
XRN1-209ENST00000472625 GNRHRP30968 328 aa2.54□□□□□ -2
XRN1-209ENST00000472625 TFPI2P48307 235 aa2.54□□□□□ -2
XRN1-209ENST00000472625 AMTP48728 403 aa2.54□□□□□ -2
XRN1-209ENST00000472625 OR10A3P58181 314 aa2.54□□□□□ -2
XRN1-209ENST00000472625 PRCDQ00LT1 54 aa2.54□□□□□ -2
XRN1-209ENST00000472625 WT1-ASQ06250 92 aa2.54□□□□□ -2
XRN1-209ENST00000472625 LGALS9BQ3B8N2 356 aa2.54□□□□□ -2
XRN1-209ENST00000472625 TMEM69Q5SWH9 247 aa2.54□□□□□ -2
XRN1-209ENST00000472625 SPATA31B1PQ5VZV4 182 aa2.54□□□□□ -2
XRN1-209ENST00000472625 C22orf42Q6IC83 251 aa2.54□□□□□ -2
XRN1-209ENST00000472625 LAIR2Q6ISS4 152 aa2.54□□□□□ -2
XRN1-209ENST00000472625 ZNF818PQ6ZRF7 136 aa2.54□□□□□ -2
XRN1-209ENST00000472625 TCF24Q7RTU0 167 aa2.54□□□□□ -2
XRN1-209ENST00000472625 H2BFWTQ7Z2G1 175 aa2.54□□□□□ -2
XRN1-209ENST00000472625 NOXA1Q86UR1 476 aa2.54□□□□□ -2
XRN1-209ENST00000472625 APRG1Q8IVJ8 170 aa2.54□□□□□ -2
XRN1-209ENST00000472625 UBE2DNLQ8IWF7 75 aa2.54□□□□□ -2
XRN1-209ENST00000472625 POM121L12Q8N7R1 296 aa2.54□□□□□ -2
XRN1-209ENST00000472625 SLC35G3Q8N808 338 aa2.54□□□□□ -2
XRN1-209ENST00000472625 Q8NAQ8 132 aa2.54□□□□□ -2
XRN1-209ENST00000472625 OR5H2Q8NGV7 314 aa2.54□□□□□ -2
XRN1-209ENST00000472625 OR6F1Q8NGZ6 308 aa2.54□□□□□ -2
XRN1-209ENST00000472625 LGALS14Q8TCE9 139 aa2.54□□□□□ -2
XRN1-209ENST00000472625 SLC25A46Q96AG3 418 aa2.54□□□□□ -2
XRN1-209ENST00000472625 MOB3AQ96BX8 217 aa2.54□□□□□ -2
XRN1-209ENST00000472625 S100A16Q96FQ6 103 aaKnown RBP2.54□□□□□ -2
XRN1-209ENST00000472625 ZNF486Q96H40 463 aaPredicted RBP2.54□□□□□ -2
XRN1-209ENST00000472625 CHRDL1Q9BU40 450 aa2.54□□□□□ -2
XRN1-209ENST00000472625 MS4A6AQ9H2W1 248 aa2.54□□□□□ -2
XRN1-209ENST00000472625 VSIRQ9H7M9 311 aa2.54□□□□□ -2
XRN1-209ENST00000472625 VCX3AQ9NNX9 186 aa2.54□□□□□ -2
XRN1-209ENST00000472625 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
XRN1-209ENST00000472625 EHFQ9NZC4 300 aa2.54□□□□□ -2
XRN1-209ENST00000472625 RABAC1Q9UI14 185 aa2.54□□□□□ -2
XRN1-209ENST00000472625 RRP15Q9Y3B9 282 aaKnown RBP2.54□□□□□ -2
XRN1-209ENST00000472625 S4R3C0 116 aa2.54□□□□□ -2
XRN1-209ENST00000472625 DNAH17Q9UFH2 4485 aa2.54□□□□□ -2
XRN1-209ENST00000472625 LRP1BQ9NZR2 4599 aa2.53□□□□□ -2
XRN1-209ENST00000472625 IGKV3-7A0A075B6H7 116 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TRAV18A0A075B6X5 111 aa2.53□□□□□ -2
XRN1-209ENST00000472625 DEFB131BA0A096LNP1 70 aa2.53□□□□□ -2
XRN1-209ENST00000472625 TEX50A0A1B0GTY4 177 aa2.53□□□□□ -2
XRN1-209ENST00000472625 E7EUB6 86 aa2.53□□□□□ -2
XRN1-209ENST00000472625 INS-IGF2F8WCM5 200 aa2.53□□□□□ -2
XRN1-209ENST00000472625 I3L2K1 104 aa2.53□□□□□ -2
XRN1-209ENST00000472625 XRCC3O43542 346 aa2.53□□□□□ -2
XRN1-209ENST00000472625 MT-CO2P00403 227 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms