RNA–Protein interactions for RNA: ENST00000472588.5

PAXBP1-208, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,410 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-208ENST00000472588 RPLP1P05386 114 aaKnown RBP17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 CAMLGP49069 296 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 PROK1P58294 105 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 DEFA5Q01523 94 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 ZNF491Q8N8L2 437 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 HSD17B11Q8NBQ5 300 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 WFDC12Q8WWY7 111 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 ST8SIA2Q92186 375 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 NPCDR1Q9BY65 106 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 ARV1Q9H2C2 271 aa17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 MRPL36Q9P0J6 103 aaKnown RBP17.32■□□□□ 0.36
PAXBP1-208ENST00000472588 OR10J1P30954 320 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 SELENOTP62341 195 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 SPSB3Q6PJ21 355 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 TRGV9Q99603 122 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 TIMM9Q9Y5J7 89 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 S4R3C0 116 aa17.31■□□□□ 0.36
PAXBP1-208ENST00000472588 AGPAT2O15120 278 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 NUPL2O15504 423 aaKnown RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 IGHV3-23P01764 117 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 CLEC3BP05452 202 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 IGLC1P0CG04 106 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 CDX1P47902 265 aaPredicted RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 KRTAP24-1Q3LI83 254 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 ZNF343Q6P1L6 599 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 LCNL1Q6ZST4 164 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 TMEM158Q8WZ71 300 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 MDFIQ99750 246 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 PSMG3Q9BT73 122 aaPredicted RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 IGKV1OR2-108A0A075B7D4 117 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 TCRBV4S1A1TA0A5B7 111 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 ATP6V0CP27449 155 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 KIAA0141Q14154 515 aaPredicted RBP17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 CLEC19AQ6UXS0 136 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 PHYHIPLQ96FC7 376 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 CCDC140Q96MF4 163 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 MGST2Q99735 147 aa17.3■□□□□ 0.36
PAXBP1-208ENST00000472588 OR2T8A6NH00 312 aa17.29■□□□□ 0.36
PAXBP1-208ENST00000472588 F8W735 103 aaPredicted RBP17.29■□□□□ 0.36
PAXBP1-208ENST00000472588 SEC11BP0C7V7 166 aa17.29■□□□□ 0.36
PAXBP1-208ENST00000472588 GPR183P32249 361 aa17.29■□□□□ 0.36
PAXBP1-208ENST00000472588 CYP2G1PQ6ZSU1 146 aa17.29■□□□□ 0.36
PAXBP1-208ENST00000472588 CFDP00746 253 aaPredicted RBP17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 IGHV3-11P01762 117 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 SPP1P10451 314 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 RPL29P47914 159 aaKnown RBP17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 YPEL3P61236 119 aaPredicted RBP17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 SERF2P84101 59 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 RUNX1Q01196 453 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 RSG1Q9BU20 258 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 GGTLC1Q9BX51 225 aa17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 PEF1Q9UBV8 284 aaKnown RBP17.28■□□□□ 0.36
PAXBP1-208ENST00000472588 IGKV1D-37A0A075B6S9 117 aa17.27■□□□□ 0.35
PAXBP1-208ENST00000472588 TGOLN2O43493 480 aa17.27■□□□□ 0.35
PAXBP1-208ENST00000472588 CTSGP08311 255 aa17.27■□□□□ 0.35
PAXBP1-208ENST00000472588 SLC25A32Q9H2D1 315 aa17.27■□□□□ 0.35
PAXBP1-208ENST00000472588 SLC45A2Q9UMX9 530 aa17.27■□□□□ 0.35
PAXBP1-208ENST00000472588 LGALS1P09382 135 aaKnown RBP17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 ARL3P36405 182 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 RELQ04864 619 aaPredicted RBP17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 ZNF616Q08AN1 781 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 TCTEX1D4Q5JR98 221 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 KHDC1LQ5JSQ8 128 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 Q6ZRG5 221 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 BPIFCQ8NFQ6 507 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 Q8WTZ3 238 aa17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 TSSC4Q9Y5U2 329 aaPredicted RBP17.26■□□□□ 0.35
PAXBP1-208ENST00000472588 TSPAN15O95858 294 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 IGKV1-17P01599 117 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 RD3LP0DJH9 198 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 TIGITQ495A1 244 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 OR2G3Q8NGZ4 309 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 C4orf3Q8WVX3 66 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 GNB4Q9HAV0 340 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 PXMP4Q9Y6I8 212 aa17.25■□□□□ 0.35
PAXBP1-208ENST00000472588 TOMM40O96008 361 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 MBP02144 154 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 B2MP61769 119 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 ZNF90Q03938 601 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 TEX261Q6UWH6 196 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 ZNF600Q6ZNG1 722 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 STPG3Q8N7X2 389 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 C19orf24Q9BVV8 132 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 SH3BGRL3Q9H299 93 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 COL6A5A8TX70 2615 aa17.24■□□□□ 0.35
PAXBP1-208ENST00000472588 GGCTO75223 188 aaKnown RBP17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 IFNA7P01567 189 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 CD28P10747 220 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PRR20EP86478 221 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PRR20CP86479 221 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PRR20DP86480 221 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PRR20BP86481 221 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PRR20AP86496 221 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 PXDC1Q5TGL8 231 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 OR51G1Q8NGK1 321 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 TMED6Q8WW62 240 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 OR5B12Q96R08 314 aa17.23■□□□□ 0.35
PAXBP1-208ENST00000472588 CHRDL1Q9BU40 450 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms