RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 A0A1W2PS18 150 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 FAM90A26D6RGX4 464 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 PAX4O43316 350 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 NXPH3O95157 252 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 SPART-AS1P0CW21 52 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 HSPA13P48723 471 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 FAM3BP58499 235 aaPredicted RBP6.58□□□□□ -1.36
VCL-204ENST00000472585 TAS2R20P59543 309 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 USF2Q15853 346 aaPredicted RBP6.58□□□□□ -1.36
VCL-204ENST00000472585 BSXQ3C1V8 233 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 IZUMO2Q6UXV1 221 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 OR5H2Q8NGV7 314 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 OR4X1Q8NH49 305 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 TMEM170AQ8WVE7 144 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 METTL26Q96S19 204 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 NEU1Q99519 415 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 ATG101Q9BSB4 218 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 IFT46Q9NQC8 304 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 DKK2Q9UBU2 259 aa6.58□□□□□ -1.36
VCL-204ENST00000472585 FLG2Q5D862 2391 aaPredicted RBP6.57□□□□□ -1.36
VCL-204ENST00000472585 LOC100506127A0A0U1RQW1 187 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 HELTA6NFD8 242 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 PRM2P04554 102 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 IGLC1P0CG04 106 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 HTN3P15516 51 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 PI3P19957 117 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 RPL5P46777 297 aaKnown RBP6.57□□□□□ -1.36
VCL-204ENST00000472585 GABARAPL2P60520 117 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 DHODHQ02127 395 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 FAM222AQ5U5X8 452 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 C1orf158Q8N1D5 194 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 ZNF709Q8N972 641 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 GPX8Q8TED1 209 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 TMEM230Q96A57 120 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 TP53RKQ96S44 253 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 C1QTNF4Q9BXJ3 329 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 TMEM231Q9H6L2 316 aa6.57□□□□□ -1.36
VCL-204ENST00000472585 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 NBDYA0A0U1RRE5 68 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 TMEM189A5PLL7 270 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 BUB3O43684 328 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 IGKV3-20P01619 116 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 HLA-DRB4P13762 266 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 SNCAP37840 140 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 RPS19P39019 145 aaKnown RBP6.56□□□□□ -1.36
VCL-204ENST00000472585 UCP3P55916 312 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 NUTF2P61970 127 aaKnown RBP6.56□□□□□ -1.36
VCL-204ENST00000472585 PRSS54Q6PEW0 395 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 TMEM88Q6PEY1 159 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 S100A16Q96FQ6 103 aaKnown RBP6.56□□□□□ -1.36
VCL-204ENST00000472585 C18orf15Q96N68 181 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 YTHDF1Q9BYJ9 559 aaKnown RBP6.56□□□□□ -1.36
VCL-204ENST00000472585 WDR12Q9GZL7 423 aaKnown RBP6.56□□□□□ -1.36
VCL-204ENST00000472585 BLOC1S6Q9UL45 172 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 HLA-DRB4X5D2U9 266 aa6.56□□□□□ -1.36
VCL-204ENST00000472585 TEX48A0A1B0GUV7 120 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 HNRNPCP07910 306 aaKnown RBP eCLIP6.55□□□□□ -1.36
VCL-204ENST00000472585 PRSS3P35030 304 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 OPRK1P41145 380 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 TAS2R46P59540 309 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 SP6Q3SY56 376 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 SAMD12Q8N8I0 201 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 FRZBQ92765 325 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 C17orf77Q96MU5 243 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 NIPSNAP3BQ9BS92 247 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 SLC35B3Q9H1N7 401 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 NRN1Q9NPD7 142 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 FAT1Q14517 4588 aa6.55□□□□□ -1.36
VCL-204ENST00000472585 F6UB75 175 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 M0QYG6 137 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 ELK1P19419 428 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 RND2P52198 227 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 YPEL3P61236 119 aaPredicted RBP6.54□□□□□ -1.36
VCL-204ENST00000472585 TSPAN5P62079 268 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 AARDQ4LEZ3 155 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 UBE2NLQ5JXB2 153 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 TMEM69Q5SWH9 247 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 SLC35G3Q8N808 338 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 ZNRF2Q8NHG8 242 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 RAB26Q9ULW5 256 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 YTHDF2Q9Y5A9 579 aaKnown RBP6.54□□□□□ -1.36
VCL-204ENST00000472585 RFNGQ9Y644 331 aa6.54□□□□□ -1.36
VCL-204ENST00000472585 SMIM9A6NGZ8 99 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 SOCS3O14543 225 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 IL4P05112 153 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 OR10J1P30954 320 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 NKX2-1P43699 371 aaPredicted RBP6.53□□□□□ -1.36
VCL-204ENST00000472585 HOXA1P49639 335 aaPredicted RBP6.53□□□□□ -1.36
VCL-204ENST00000472585 AP2S1P53680 142 aaPredicted RBP6.53□□□□□ -1.36
VCL-204ENST00000472585 SUB1P53999 127 aaKnown RBP eCLIP6.53□□□□□ -1.36
VCL-204ENST00000472585 PIGPP57054 158 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 KRTAP10-2P60368 255 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 RND3P61587 244 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 OXA1LQ15070 435 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 ZNF79Q15937 498 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 KCTD21Q4G0X4 260 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 Q5VSD8 79 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 SIGLEC15Q6ZMC9 328 aa6.53□□□□□ -1.36
VCL-204ENST00000472585 LHFPL1Q86WI0 220 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms