RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 KLF17Q5JT82 389 aaPredicted RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 FAM223AQ8IWN6 122 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 ZNF383Q8NA42 475 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 OR10D4PQ8NGN7 298 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 RARRES2Q99969 163 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 GSX1Q9H4S2 264 aaPredicted RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 RPL13AP40429 203 aaKnown RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 HNRNPA3P51991 378 aaKnown RBP10.03□□□□□ -0.8
IRF1-208ENST00000472045 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 RNF144BQ7Z419 303 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 PARLQ9H300 379 aa10.03□□□□□ -0.8
IRF1-208ENST00000472045 ZNF324O75467 553 aaPredicted RBP10.02□□□□□ -0.8
IRF1-208ENST00000472045 ERVK11-1P61568 191 aa10.02□□□□□ -0.8
IRF1-208ENST00000472045 FMC1Q96HJ9 113 aa10.02□□□□□ -0.8
IRF1-208ENST00000472045 KCNS1Q96KK3 526 aa10.02□□□□□ -0.8
IRF1-208ENST00000472045 SPRY4Q9C004 299 aa10.02□□□□□ -0.8
IRF1-208ENST00000472045 SELENOKQ9Y6D0 94 aa10.02□□□□□ -0.8
IRF1-208ENST00000472045 HELZP42694 1942 aaKnown RBP10.02□□□□□ -0.81
IRF1-208ENST00000472045 LDLRAD4O15165 306 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 HLA-DQA1P01909 254 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 Q5BKY6 102 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 C2orf16Q68DN1 1984 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 SHISA9B4DS77 424 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 FAM3BP58499 235 aaPredicted RBP10.02□□□□□ -0.81
IRF1-208ENST00000472045 LHFPL4Q7Z7J7 247 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 CBLN2Q8IUK8 224 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 FER1L5A0AVI2 2057 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 RPL29P47914 159 aaKnown RBP10.02□□□□□ -0.81
IRF1-208ENST00000472045 ADORA2A-AS1P86434 159 aa10.02□□□□□ -0.81
IRF1-208ENST00000472045 PTPRQQ9UMZ3 2332 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 CD7P09564 240 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 PIEZO1Q92508 2521 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 NTF4P34130 210 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 MUC21Q5SSG8 566 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 KIF26AQ9ULI4 1882 aaPredicted RBP10.01□□□□□ -0.81
IRF1-208ENST00000472045 A0A1B0GWJ7 208 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 OR11H4Q8NGC9 324 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 OR1N2Q8NGR9 330 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 ZNF502Q8TBZ5 544 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 DKK4Q9UBT3 224 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 TRBV20OR9-2A0A075B6H5 130 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 NDUFS7O75251 213 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 NMBP08949 121 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
IRF1-208ENST00000472045 PRORYQ9H606 182 aa10.01□□□□□ -0.81
IRF1-208ENST00000472045 PEF1Q9UBV8 284 aaKnown RBP10.01□□□□□ -0.81
IRF1-208ENST00000472045 OVOL1O14753 267 aa10□□□□□ -0.81
IRF1-208ENST00000472045 LOXP28300 417 aaPredicted RBP10□□□□□ -0.81
IRF1-208ENST00000472045 TMEM183BQ1AE95 376 aa10□□□□□ -0.81
IRF1-208ENST00000472045 ASCL4Q6XD76 172 aa10□□□□□ -0.81
IRF1-208ENST00000472045 SCN8AQ9UQD0 1980 aa10□□□□□ -0.81
IRF1-208ENST00000472045 LINC00862A6NCI5 91 aa10□□□□□ -0.81
IRF1-208ENST00000472045 M0R3E3 92 aa10□□□□□ -0.81
IRF1-208ENST00000472045 HS3ST6Q96QI5 342 aa10□□□□□ -0.81
IRF1-208ENST00000472045 TMEM250H0YL14 139 aa10□□□□□ -0.81
IRF1-208ENST00000472045 VENTXO95231 258 aa10□□□□□ -0.81
IRF1-208ENST00000472045 ID3Q02535 119 aa10□□□□□ -0.81
IRF1-208ENST00000472045 OR5AN1Q8NGI8 311 aa10□□□□□ -0.81
IRF1-208ENST00000472045 F11RQ9Y624 299 aaKnown RBP10□□□□□ -0.81
IRF1-208ENST00000472045 DOCK9Q9BZ29 2069 aa10□□□□□ -0.81
IRF1-208ENST00000472045 TEX36Q5VZQ5 186 aa10□□□□□ -0.81
IRF1-208ENST00000472045 ZNF581Q9P0T4 197 aa10□□□□□ -0.81
IRF1-208ENST00000472045 LINC00473A8K010 186 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 C5orf24Q7Z6I8 188 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 SPOCK3Q9BQ16 436 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
IRF1-208ENST00000472045 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
IRF1-208ENST00000472045 ASCL2Q99929 193 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 GRIFINA4D1Z8 144 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
IRF1-208ENST00000472045 RPL15P61313 204 aaKnown RBP9.99□□□□□ -0.81
IRF1-208ENST00000472045 KLK15Q9H2R5 256 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 IFT22Q9H7X7 185 aa9.99□□□□□ -0.81
IRF1-208ENST00000472045 MPDZO75970 2070 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 TRAV21A0A0B4J279 112 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 FOSL1P15407 271 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 GCSHP23434 173 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 TBX15Q96SF7 602 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 DOCK7Q96N67 2140 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 UBE2DNLQ8IWF7 75 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 SFRP2Q96HF1 295 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 FABP5P3A8MUU1 101 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 ITGB1BP1O14713 200 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 ZNF688P0C7X2 276 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 PYYP10082 97 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 PSG1P11464 419 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 MDKP21741 143 aaPredicted RBP9.98□□□□□ -0.81
IRF1-208ENST00000472045 LHFPL1Q86WI0 220 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 WFDC12Q8WWY7 111 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 GEMIN7Q9H840 131 aaKnown RBP9.98□□□□□ -0.81
IRF1-208ENST00000472045 PHF3Q92576 2039 aaKnown RBP9.98□□□□□ -0.81
IRF1-208ENST00000472045 TRGV11A0A075B6L2 103 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
IRF1-208ENST00000472045 LMO1P25800 156 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms