RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 TRAV8-1A0A0A6YYK1 113 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 LOC102725191A0A1B0GVB3 256 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SPAARA0A1B0GVQ0 90 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ARRDC5A6NEK1 342 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 EPOPA6NHQ4 379 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 KNCNA6PVL3 124 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 A8MT66 165 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 NDUFC2-KCTD14E9PQ53 114 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF670-ZNF695F2Z2N8 137 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 F5H5P2 479 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PEX7O00628 323 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 YPEL1O60688 119 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 DEDDO75618 318 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 KLF7O75840 302 aaPredicted RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 DUSP14O95147 198 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SIX6O95475 246 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SFT2D2O95562 160 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 CXorf1O96002 111 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 NAPSAO96009 420 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 HRASP01112 189 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 CHTF8P0CG12 524 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SLC25A4P12235 298 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 COX7A1P24310 79 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 RPL22P35268 128 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 LPAR6P43657 344 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 POLR2JP52435 117 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 MP68P56378 58 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM258P61165 79 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 REG3AQ06141 175 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 EIF3IQ13347 325 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 MSMO1Q15800 293 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 LINC00303Q3SY05 128 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 TDRG1Q3Y452 100 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PYDC2Q56P42 97 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 STPG1Q5TH74 334 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 C19orf48Q6RUI8 117 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ACP7Q6ZNF0 438 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 Q6ZUT4 128 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 FAM19A3Q7Z5A8 133 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SGPP2Q8IWX5 399 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM61Q8N0U2 210 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ANKRD29Q8N6D5 301 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 OR4X2Q8NGF9 303 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 OR4A5Q8NH83 315 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 C2orf15Q8WU43 125 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM190Q8WZ59 177 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 MAL2Q969L2 176 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 LINC00526Q96FQ7 95 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 C18orf15Q96N68 181 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 YPEL2Q96QA6 119 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 SDF2Q99470 211 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ADAT1Q9BUB4 502 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 POLR2J2Q9GZM3 115 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 IMUPQ9GZP8 106 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PDFQ9HBH1 243 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 CACNG5Q9UF02 275 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 LINC00527Q9UJ94 153 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 KLK13Q9UKR3 277 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PXMP4Q9Y6I8 212 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 V9GYH0 126 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 EFCAB5A4FU69 1503 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ATP7AQ04656 1500 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ARHGAP5Q13017 1502 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 HEATR5AQ86XA9 2040 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 ANK1P16157 1881 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PDCD11Q14690 1871 aaKnown RBP2.45□□□□□ -2.02
SCN3A-207ENST00000471697 PTPN23Q9H3S7 1636 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 CACNA1IQ9P0X4 2223 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 IFT172Q9UG01 1749 aa2.45□□□□□ -2.02
SCN3A-207ENST00000471697 GLI3P10071 1580 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 TNS2Q63HR2 1409 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 RBBP6Q7Z6E9 1792 aaKnown RBP2.44□□□□□ -2.02
SCN3A-207ENST00000471697 NFAT5O94916 1531 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 KIAA0586Q9BVV6 1533 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 ADCY10Q96PN6 1610 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 TRGV10A0A0A0MS01 117 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 TRAV4A0A0B4J268 109 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 C3orf85A0A1B0GTC6 90 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 TMEM235A6NFC5 223 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 OR2T8A6NH00 312 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 PITX3O75364 302 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 HYPMO75409 117 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 APOMO95445 188 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 BGLAPP02818 100 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 SFTA3P0C7M3 94 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 FABP2P12104 132 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 TPT1P13693 172 aaKnown RBP2.44□□□□□ -2.02
SCN3A-207ENST00000471697 IL3RAP26951 378 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 PPP1CCP36873 323 aaKnown RBP2.44□□□□□ -2.02
SCN3A-207ENST00000471697 RPL23P62829 140 aaKnown RBP2.44□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF90Q03938 601 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 SLC38A11Q08AI6 406 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 ELOBQ15370 118 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 ZNF79Q15937 498 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 RSPO1Q2MKA7 263 aaPredicted RBP2.44□□□□□ -2.02
SCN3A-207ENST00000471697 Q56UQ5 140 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 PSMG4Q5JS54 123 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 UBE2NLQ5JXB2 153 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 ADAMTSL4-AS1Q5T5F5 129 aa2.44□□□□□ -2.02
SCN3A-207ENST00000471697 LINC01545Q5VT33 79 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms