RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZFAND6Q6FIF0 208 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 Q8N1Y9 231 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 RNASEH2CQ8TDP1 164 aaKnown RBP6.93□□□□□ -1.3
SF3A1-206ENST00000471037 MFFQ9GZY8 342 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 PAIP2BQ9ULR5 123 aaKnown RBP6.93□□□□□ -1.3
SF3A1-206ENST00000471037 HSPB11Q9Y547 144 aa6.93□□□□□ -1.3
SF3A1-206ENST00000471037 PMS2P5A8MQ11 134 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 H3BUA1 57 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 BRI3O95415 125 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 HSPB1P04792 205 aaKnown RBP6.92□□□□□ -1.3
SF3A1-206ENST00000471037 IFNA4P05014 189 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 DEFA4P12838 97 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 HIST1H1BP16401 226 aaKnown RBP6.92□□□□□ -1.3
SF3A1-206ENST00000471037 C4BPBP20851 252 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 S100A11P31949 105 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 EIF2B2P49770 351 aaKnown RBP6.92□□□□□ -1.3
SF3A1-206ENST00000471037 KLK9Q2XQG4 91 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 KCNRGQ8N5I3 272 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 OR5T1Q8NG75 326 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 OR10P1Q8NGE3 313 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM170AQ8WVE7 144 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 PINX1Q96BK5 328 aaKnown RBP6.92□□□□□ -1.3
SF3A1-206ENST00000471037 GGACTQ9BVM4 153 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 SLA2Q9H6Q3 261 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 THYN1Q9P016 225 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 KLK9Q9UKQ9 250 aa6.92□□□□□ -1.3
SF3A1-206ENST00000471037 IGLV11-55A0A075B6I3 123 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 RPS10-NUDT3A0A1W2PQS6 291 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 TAAR5O14804 337 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 DFFBO76075 338 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 CST7O76096 145 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 CXCL2P19875 107 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 AP2S1P53680 142 aaPredicted RBP6.91□□□□□ -1.3
SF3A1-206ENST00000471037 DLK1P80370 383 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 ATP6V1FQ16864 119 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 OR8G2PQ6IF36 304 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 ETFRF1Q6IPR1 90 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 SLC25A24Q6NUK1 477 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 ADAMTSL5Q6ZMM2 481 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 C9orf62Q8N4C0 152 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM217Q8N7C4 229 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 OR1S2Q8NGQ3 325 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 CACNG8Q8WXS5 425 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 ELOVL1Q9BW60 279 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
SF3A1-206ENST00000471037 KANTRA0A1W2PQU2 76 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 PRSS46E5RG02 174 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 FNDC10F2Z333 226 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 IGHV3-11P01762 117 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 GPX4P36969 197 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-206ENST00000471037 OPRK1P41145 380 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 NKX2-5P52952 324 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-206ENST00000471037 MFAP2P55001 183 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 TPPP2P59282 170 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 NHLH2Q02577 135 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 SLC38A11Q08AI6 406 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 ARL16Q0P5N6 197 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 LGALSLQ3ZCW2 172 aaPredicted RBP6.9□□□□□ -1.3
SF3A1-206ENST00000471037 HAPLN4Q86UW8 402 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 LILRB2Q8N423 598 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 OR5C1Q8NGR4 320 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 MISP3Q96FF7 219 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 FANCD2OSQ96PS1 177 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 TMEM147Q9BVK8 224 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 ARL6Q9H0F7 186 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 FBXL17Q9UF56 701 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 DMRT1Q9Y5R6 373 aa6.9□□□□□ -1.3
SF3A1-206ENST00000471037 TRBV9A0A0B4J1U6 114 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 BCL2L11O43521 198 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 PRH1P02810 166 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 ZP3P21754 424 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF266Q14584 549 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 HAGHQ16775 308 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 VWC2Q2TAL6 325 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 LAMTOR1Q6IAA8 161 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 C19orf35Q6ZS72 473 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 TMUB2Q71RG4 321 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 SLC16A13Q7RTY0 426 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 NECAP1Q8NC96 275 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 SLC35E1Q96K37 410 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 CXorf58Q96LI9 332 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 MS4A10Q96PG2 267 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 ATP5SQ99766 215 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 ZNF355PQ9NSJ1 428 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 UQCC1Q9NVA1 299 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
SF3A1-206ENST00000471037 HYDINQ4G0P3 5121 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 BORCS7-ASMTA0A0B4J1R7 106 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 I3L2K1 104 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 K7EIM0 57 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 OR2J3O76001 311 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 JTBO76095 146 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 MT-CO2P00403 227 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 TRGV3P03979 118 aa6.88□□□□□ -1.31
SF3A1-206ENST00000471037 EIF5AP63241 154 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms