RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CASC10Q5T4H9 136 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 SYT6Q5T7P8 510 aaPredicted RBP1.82□□□□□ -2.12
UBXN4-206ENST00000470687 TCF23Q7RTU1 214 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 CAMK2N1Q7Z7J9 78 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 SGPP2Q8IWX5 399 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 HS3ST5Q8IZT8 346 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 CBR4Q8N4T8 237 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 PACRGLQ8N7B6 248 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 SUMF2Q8NBJ7 301 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 OR10R2Q8NGX6 335 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 VSTM2AQ8TAG5 236 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 MUC7Q8TAX7 377 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 NEK7Q8TDX7 302 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 TNFAIP8L1Q8WVP5 186 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 DCUN1D4Q92564 292 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 ARPC1AQ92747 370 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 IL22RA2Q969J5 263 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 PTX4Q96A99 478 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 EEF1AKMT3Q96AZ1 226 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 SMIM19Q96E16 107 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 TMEM101Q96IK0 257 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 ADTRPQ96IZ2 230 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 ZNF488Q96MN9 340 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 KCTD7Q96MP8 289 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 TSNAXQ99598 290 aaKnown RBP1.82□□□□□ -2.12
UBXN4-206ENST00000470687 TOLLIPQ9H0E2 274 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 PARP12Q9H0J9 701 aaKnown RBP1.82□□□□□ -2.12
UBXN4-206ENST00000470687 VCXQ9H320 206 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 ZNF286AQ9HBT8 521 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 MCUBQ9NWR8 336 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 XCL2Q9UBD3 114 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 NUBP2Q9Y5Y2 271 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 PKD1L1Q8TDX9 2849 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 NOTCH1P46531 2555 aa1.82□□□□□ -2.12
UBXN4-206ENST00000470687 CUBNO60494 3623 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 IGKV1-12A0A0C4DH73 117 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 WI2-2373I1.2A0A1W2PRP0 233 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 FAM231BA6NCW3 169 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TEX46H3BTG2 121 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 I3L521 148 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 GABRPO00591 440 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PEX7O00628 323 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PDCD6O75340 191 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ARL6IP5O75915 188 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 OR2A4O95047 310 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 NDUFA3O95167 84 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TSPAN13O95857 204 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 IGKV1D-12P01611 117 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 HBE1P02100 147 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 APOA1P02647 267 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CDK1P06493 297 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 LGALS1P09382 135 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CT45A6P0DMU7 189 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CT45A5P0DMU8 189 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CT45A7P0DMV0 189 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 IGFBP3P17936 291 aaPredicted RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 SRMP19623 302 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 BLVRBP30043 206 aaPredicted RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 RBMXP38159 391 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TCTAP57738 103 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ARPC4P59998 168 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ACTBP60709 375 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 HERVK_113P61574 105 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 LYZP61626 148 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 NUTF2P61970 127 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 MRPS15P82914 257 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PITPNAQ00169 270 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 KIAA0087Q14695 138 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 MMDQ15546 238 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 C5orf64Q2M2E5 130 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ACTBL2Q562R1 376 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CT45A1Q5HYN5 189 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 GPR107Q5VW38 600 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 THOC7Q6I9Y2 204 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 LCN12Q6JVE5 192 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ZNF833PQ6ZTB9 187 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 SSX6Q7RTT6 188 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 MRPL55Q7Z7F7 128 aaKnown RBP1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PDPNQ86YL7 162 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 Q8N402 240 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ZNF439Q8NDP4 499 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 OR13C9Q8NGT0 318 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CT45A3Q8NHU0 189 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 LRRC20Q8TCA0 184 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 C7orf33Q8WU49 177 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 BORCS5Q969J3 196 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TMEM230Q96A57 120 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 FAM3DQ96BQ1 224 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ISOC1Q96CN7 298 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TBX5Q99593 518 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 SPIN2AQ99865 258 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 SPIN2BQ9BPZ2 258 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PDCD1LG2Q9BQ51 273 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 AGMATQ9BSE5 352 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 CCDC90BQ9GZT6 254 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 DCSTAMPQ9H295 470 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 TAF9BQ9HBM6 251 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 VCX3AQ9NNX9 186 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 ACOT13Q9NPJ3 140 aa1.81□□□□□ -2.12
UBXN4-206ENST00000470687 PLEKHJ1Q9NW61 149 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms