RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 RELQ04864 619 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF345Q14585 488 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 SPSB3Q6PJ21 355 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 SHISA2Q6UWI4 295 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 CLEC19AQ6UXS0 136 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 NDUFA11Q86Y39 141 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF491Q8N8L2 437 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF709Q8N972 641 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 OR4X1Q8NH49 305 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 SCARB1Q8WTV0 552 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 BSCL2Q96G97 398 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 CITED2Q99967 270 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 NEURL2Q9BR09 285 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 ARL6Q9H0F7 186 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 FNDC4Q9H6D8 234 aaPredicted RBP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 KCNIP2Q9NS61 270 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 PEF1Q9UBV8 284 aaKnown RBP6.31□□□□□ -1.4
HDAC6-216ENST00000468949 FBXL17Q9UF56 701 aa6.31□□□□□ -1.4
HDAC6-216ENST00000468949 TNCP24821 2201 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TET2Q6N021 2002 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-216ENST00000468949 C17orf112F2Z3M2 114 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TAAR5O14804 337 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TGOLN2O43493 480 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 CLN5O75503 358 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 ZP3P21754 424 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 FGF7P21781 194 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 CDX1P47902 265 aaPredicted RBP6.3□□□□□ -1.4
HDAC6-216ENST00000468949 EIF5AP63241 154 aaKnown RBP6.3□□□□□ -1.4
HDAC6-216ENST00000468949 NHLH2Q02577 135 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 RPEL1Q2QD12 228 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 PVRIGQ6DKI7 326 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF343Q6P1L6 599 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM144Q7Z5S9 345 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF502Q8TBZ5 544 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 TMEM170AQ8WVE7 144 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 ATP6V0BQ99437 205 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 DMRT1Q9Y5R6 373 aa6.3□□□□□ -1.4
HDAC6-216ENST00000468949 PLXNB1O43157 2135 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 RNF222A6NCQ9 220 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 LINC01619G3V211 115 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 G3V3Q6 166 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 BCL2L11O43521 198 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 GGCTO75223 188 aaKnown RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 MPDU1O75352 247 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 YIF1AO95070 293 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 CLEC3BP05452 202 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 FCGR2BP31994 310 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 CD300CQ08708 224 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF616Q08AN1 781 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 ARL16Q0P5N6 197 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 GAMTQ14353 236 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 KLK9Q2XQG4 91 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 BTNL8Q6UX41 500 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 KCNRGQ8N5I3 272 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 BPIFCQ8NFQ6 507 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 OR4F17Q8NGA8 305 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 OR11H4Q8NGC9 324 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 MYOZ3Q8TDC0 251 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 WIPF2Q8TF74 440 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 CCDC140Q96MF4 163 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 OR4F4Q96R69 305 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF471Q9BX82 626 aaPredicted RBP6.29□□□□□ -1.4
HDAC6-216ENST00000468949 KLK9Q9UKQ9 250 aa6.29□□□□□ -1.4
HDAC6-216ENST00000468949 PMS2P5A8MQ11 134 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 PPP5D1E7EU14 171 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 M0QZ24 198 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 JTBO76095 146 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 HSPB1P04792 205 aaKnown RBP6.28□□□□□ -1.4
HDAC6-216ENST00000468949 S100A7P31151 101 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 CAMLGP49069 296 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 NKX2-5P52952 324 aaPredicted RBP6.28□□□□□ -1.4
HDAC6-216ENST00000468949 SELENOTP62341 195 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 MLANAQ16655 118 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 DEFB136Q30KP8 78 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 TIGITQ495A1 244 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 FAM106AQ4KMX7 169 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 TCTEX1D4Q5JR98 221 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 ZNF600Q6ZNG1 722 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 TMUB2Q71RG4 321 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 S100A7AQ86SG5 101 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 HAPLN4Q86UW8 402 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 OR11H1Q8NG94 326 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 OR1N2Q8NGR9 330 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 Q8WTZ3 238 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 PPP1R14BQ96C90 147 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
HDAC6-216ENST00000468949 TRGV9Q99603 122 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 CITED1Q99966 193 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 GINS3Q9BRX5 216 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 C20orf24Q9BUV8 137 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 PBDC1Q9BVG4 233 aa6.28□□□□□ -1.4
HDAC6-216ENST00000468949 IGHV4OR15-8A0A075B7B6 117 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms