RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 GPN1Q9HCN4 374 aaPredicted RBP11.16□□□□□ -0.62
TMEM39A-205ENST00000468676 SMPXQ9UHP9 88 aa11.16□□□□□ -0.62
TMEM39A-205ENST00000468676 PUS1Q9Y606 427 aaKnown RBP eCLIP11.16□□□□□ -0.62
TMEM39A-205ENST00000468676 IGHV7-4-1A0A0J9YVY3 117 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 PRAF2O60831 178 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 CD5P06127 495 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 IGLC1P0CG04 106 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 GUCA2BQ16661 112 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 NRARPQ7Z6K4 114 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 TMEM61Q8N0U2 210 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 NPIPB3Q92617 1050 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 ACY3Q96HD9 319 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 ZNF414Q96IQ9 312 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 GSKIPQ9P0R6 139 aa11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 STRAPQ9Y3F4 350 aaKnown RBP11.15□□□□□ -0.62
TMEM39A-205ENST00000468676 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 A8MZ25 164 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 ZNF207O43670 478 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 NHLRC4P0CG21 123 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 TAS2R30P59541 319 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 SPANXN5Q5MJ07 72 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 Q8WTZ3 238 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 WDR89Q96FK6 387 aaPredicted RBP11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 SMIM8Q96KF7 97 aa11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 PAIP2BQ9ULR5 123 aaKnown RBP11.14□□□□□ -0.63
TMEM39A-205ENST00000468676 C5orf51A6NDU8 294 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 SNRPGP15A8MWD9 76 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 INMT-MINDY4F8WBC2 141 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 CHEK1O14757 476 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 TSPAN4O14817 238 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 FABP1P07148 127 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 NPPCP23582 126 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 CD81P60033 236 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 GAMTQ14353 236 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 TIGITQ495A1 244 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 NARS2Q96I59 477 aaKnown RBP11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 METTL26Q96S19 204 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 SPAG8Q99932 426 aaPredicted RBP11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 NEURL2Q9BR09 285 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 MARVELD1Q9BSK0 173 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 RHPN1-AS1Q9BWJ2 59 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 TMEM231Q9H6L2 316 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 ZFAND3Q9H8U3 227 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 PSENENQ9NZ42 101 aa11.13□□□□□ -0.63
TMEM39A-205ENST00000468676 A0A1W2PS18 150 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 FAM25EA8MYX2 175 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 SSSCA1O60232 199 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 RD3LP0DJH9 198 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 IGHV4-30-4P0DP06 118 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 GSG1LQ6UXU4 331 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 C2orf50Q96LR7 162 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 TUBA4BQ9H853 241 aa11.12□□□□□ -0.63
TMEM39A-205ENST00000468676 COL7A1Q02388 2944 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 ZFP92A6NM28 416 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 CCSO14618 274 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 TSC22D2O75157 780 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 TOMM40O96008 361 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 MBPP02686 304 aaPredicted RBP11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 VSIRQ9H7M9 311 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
TMEM39A-205ENST00000468676 OR4C46A6NHA9 309 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 H3BP45 60 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 FRMD6-AS1P0C7T7 363 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 CRYBB3P26998 211 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 PAFAH1B2P68402 229 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 GRAMD2BQ96HH9 432 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 RNF2Q99496 336 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 PFDN2Q9UHV9 154 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
TMEM39A-205ENST00000468676 PRSS46E5RG02 174 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 L7N2F9 121 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 CD7P09564 240 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 PAX9P55771 341 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 VAMP2P63027 116 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 THAP8Q8NA92 274 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 OR51G1Q8NGK1 321 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 TRGV9Q99603 122 aa11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 RCL1Q9Y2P8 373 aaKnown RBP11.09□□□□□ -0.63
TMEM39A-205ENST00000468676 IGHV3-49A0A0A0MS15 119 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 FNDC10F2Z333 226 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 CFDP00746 253 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 IL4P05112 153 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 HNRNPCP07910 306 aaKnown RBP eCLIP11.08□□□□□ -0.641e-6■□□□□ 10.1
TMEM39A-205ENST00000468676 PSG1P11464 419 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 PVALBP20472 110 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 TMEM14EPQ6UXP3 125 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 OR10P1Q8NGE3 313 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
TMEM39A-205ENST00000468676 FAM110AQ9BQ89 295 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms