RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 NDUFA3O95167 84 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV4-38-2P0DP08 117 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 LGALS7P47929 136 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 RPL23AP62750 156 aaKnown RBP6.58□□□□□ -1.36
BRCA1-208ENST00000468300 VWC2Q2TAL6 325 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 GCSAMLQ5JQS6 135 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 LYPD6BQ8NI32 183 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 PIFOQ8TCI5 191 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 NOL4LQ96MY1 436 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-208ENST00000468300 C20orf24Q9BUV8 137 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 SLC25A31Q9H0C2 315 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 PRNDQ9UKY0 176 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 SIGLEC9Q9Y336 463 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 RNF223E7ERA6 249 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 INS-IGF2F8WCM5 200 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 NPFFO15130 113 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 FGF16O43320 207 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV4-31P0DP07 118 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
BRCA1-208ENST00000468300 TEX45Q8NA69 505 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 OR4C5Q8NGB2 326 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 OOSP1A8MZH6 123 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 B4DSR2 109 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 JTBO76095 146 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 IGKV1D-33P01593 117 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 IGKV1-33P01594 117 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 RPL8P62917 257 aaKnown RBP6.58□□□□□ -1.36
BRCA1-208ENST00000468300 WT1-ASQ06250 92 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 MALSU1Q96EH3 234 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 RNF5Q99942 180 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 REG4Q9BYZ8 158 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 UNC79Q9P2D8 2635 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV1-69DA0A0B4J2H0 117 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 CEBPZOSA8MTT3 80 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 ZNF705EA8MWA4 302 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV1-69P01742 117 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 PPT1P50897 306 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 RANP62826 216 aaKnown RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 PRSS8Q16651 343 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 OCIAD2Q56VL3 154 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 PVRIGQ6DKI7 326 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 CIARTQ8N365 385 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 OR5B3Q8NH48 314 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 RNASEH2CQ8TDP1 164 aaKnown RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 RXFP4Q8TDU9 374 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 TMED6Q8WW62 240 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 CXorf58Q96LI9 332 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 ATP5SQ99766 215 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 MXRA5Q9NR99 2828 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 PLXNB1O43157 2135 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 IGHV3OR16-10A0A075B7F0 116 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 TEX22C9J3V5 150 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 CCL25O15444 150 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 Q96MF0 132 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 FBXO7Q9Y3I1 522 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 ANK3Q12955 4377 aaKnown RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 TEX15Q9BXT5 2789 aa6.57□□□□□ -1.36
BRCA1-208ENST00000468300 PRRC2AP48634 2157 aaKnown RBP6.57□□□□□ -1.36
BRCA1-208ENST00000468300 MOSP00540 346 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 BATFQ16520 125 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 BRD3OSQ6XYD6 125 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 CBLN2Q8IUK8 224 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 LINC01356Q8N9X3 169 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 CIB3Q96Q77 187 aaPredicted RBP6.56□□□□□ -1.36
BRCA1-208ENST00000468300 FBXL15Q9H469 300 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 WNK2Q9Y3S1 2297 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 TRAV40A0A0B4J280 105 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 IGLC7A0M8Q6 106 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 OR2J3O76001 311 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 CA2P00918 260 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 FSHBP01225 129 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 RNASE2P10153 161 aaKnown RBP6.56□□□□□ -1.36
BRCA1-208ENST00000468300 RUNX1Q01196 453 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 PPP1R27Q86WC6 154 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 WFDC11Q8NEX6 87 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 OR1S2Q8NGQ3 325 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 VSTM2AQ8TAG5 236 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 ZFP30Q9Y2G7 519 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 ITPR3Q14573 2671 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.56□□□□□ -1.363e-7■■■■■ 41.1
BRCA1-208ENST00000468300 MFAP2P55001 183 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 LRRC75BQ2VPJ9 315 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 VMA21Q3ZAQ7 101 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 CCDC144NLQ6NUI1 221 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 MEGF9Q9H1U4 602 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 SLC25A32Q9H2D1 315 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 C7orf69Q9H7B7 122 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 FKBP11Q9NYL4 201 aa6.56□□□□□ -1.36
BRCA1-208ENST00000468300 DFFBO76075 338 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 ATP6V0CP27449 155 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 SLC38A11Q08AI6 406 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 AKR1C8PQ5T2L2 129 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 RPUSD4Q96CM3 377 aaKnown RBP6.55□□□□□ -1.36
BRCA1-208ENST00000468300 GAR1Q9NY12 217 aaKnown RBP6.55□□□□□ -1.36
BRCA1-208ENST00000468300 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.55□□□□□ -1.36
BRCA1-208ENST00000468300 NBR2O15453 112 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 SEC11BP0C7V7 166 aa6.55□□□□□ -1.36
BRCA1-208ENST00000468300 EGR2P11161 476 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms