RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SLC35A3Q9Y2D2 325 aa1.54□□□□□ -2.16
GAPVD1-211ENST00000467707 CCDC144AA2RUR9 1427 aa1.54□□□□□ -2.16
GAPVD1-211ENST00000467707 NUMA1Q14980 2115 aa1.54□□□□□ -2.16
GAPVD1-211ENST00000467707 RP1L1Q8IWN7 2480 aaPredicted RBP1.54□□□□□ -2.16
GAPVD1-211ENST00000467707 PROSCO94903 275 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 UBL3O95164 117 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 RHOGP84095 191 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 PLCXD2Q0VAA5 305 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 TMED2Q15363 201 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 LINC00311Q8N616 119 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 OR11H6Q8NGC7 330 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 SLC25A40Q8TBP6 338 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 FAM172AQ8WUF8 416 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 HIST1H2BLQ99880 126 aa1.53□□□□□ -2.16
GAPVD1-211ENST00000467707 ZFHX2Q9C0A1 2572 aaPredicted RBP1.53□□□□□ -2.17
GAPVD1-211ENST00000467707 KIF13BQ9NQT8 1826 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 OR1I1O60431 355 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 SMIM17P0DL12 118 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 ERP29P30040 261 aaKnown RBP1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 MRPS15P82914 257 aaKnown RBP1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 C15orf53Q8NAA6 179 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 CRCT1Q9UGL9 99 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 CCDC88CQ9P219 2028 aa1.52□□□□□ -2.17
GAPVD1-211ENST00000467707 NESP48681 1621 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 BAZ1AQ9NRL2 1556 aaPredicted RBP1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 IGKV2D-26A0A0A0MRZ7 120 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 C2orf70A6NJV1 201 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 CYB5BO43169 146 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 CST2P09228 141 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 RAB4BP61018 213 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 TSNQ15631 228 aaKnown RBP1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 OR52R1Q8NGF1 315 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 OR8D4Q8NGM9 314 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 OR10J5Q8NHC4 309 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 TMEM133Q9H2Q1 129 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 SMARCA2P51531 1590 aa1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 THOC2Q8NI27 1593 aaKnown RBP1.51□□□□□ -2.17
GAPVD1-211ENST00000467707 ARHGEF11O15085 1522 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 STRCQ7RTU9 1775 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 A0A087WX48 190 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 HYPMO75409 117 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 HSD11B1P28845 292 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 MRPL57Q9BQC6 102 aaKnown RBP1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 SCRIBQ14160 1630 aa1.5□□□□□ -2.17
GAPVD1-211ENST00000467707 FMN1Q68DA7 1419 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 TRBV19A0A075B6N1 114 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 TRAV1-1A0A0B4J248 108 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 FAM159BA6NKW6 160 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 GEMIN2O14893 280 aaKnown RBP1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 SULT1B1O43704 296 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 ATP5HO75947 161 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 SERPINA1P01009 418 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 HOXA6P31267 233 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 EIF5AP63241 154 aaKnown RBP1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 OR2T10Q8NGZ9 312 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 TEX47Q8TBZ9 253 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 SFT2D1Q8WV19 159 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 FAM32AQ9Y421 112 aaKnown RBP1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 ADGRL3Q9HAR2 1447 aa1.49□□□□□ -2.17
GAPVD1-211ENST00000467707 SDK1Q7Z5N4 2213 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 MED1Q15648 1581 aaPredicted RBP1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 TRAV12-1A0A0B4J245 112 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 TRAV4A0A0B4J268 109 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 C1orf196B1AJZ1 125 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 MGST1P10620 155 aaKnown RBP1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 SSR2P43308 183 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 RHOBP62745 196 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 BRMS1LQ5PSV4 323 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 OR10X1Q8NGY0 326 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 C4orf3Q8WVX3 66 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 IMUPQ9GZP8 106 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 ARL5AQ9Y689 179 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 ARAP1Q96P48 1450 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 KIF21AQ7Z4S6 1674 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 BRWD1Q9NSI6 2320 aa1.48□□□□□ -2.17
GAPVD1-211ENST00000467707 SRP14P37108 136 aaKnown RBP1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 ARF6P62330 175 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 ESRGQ1W209 222 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 RNASE10Q5GAN6 216 aaKnown RBP1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 WFDC5Q8TCV5 224 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 ADAT3Q96EY9 351 aaPredicted RBP1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 YPEL2Q96QA6 119 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 ENY2Q9NPA8 101 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 ERCC6L2Q5T890 1561 aa1.47□□□□□ -2.17
GAPVD1-211ENST00000467707 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 IGKV1-9A0A0C4DH69 117 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 LYZL6O75951 148 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 CAPZBP47756 277 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 PIGPP57054 158 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 HSPE1P61604 102 aaKnown RBP1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 GOLT1AQ6ZVE7 132 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 LINC00467Q9BRT7 94 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 C14orf132Q9NPU4 83 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 OPTCQ9UBM4 332 aa1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 UTP11Q9Y3A2 253 aaKnown RBP1.46□□□□□ -2.18
GAPVD1-211ENST00000467707 HECW1Q76N89 1606 aa1.45□□□□□ -2.18
GAPVD1-211ENST00000467707 TRGV10A0A0A0MS01 117 aa1.45□□□□□ -2.18
GAPVD1-211ENST00000467707 IFNA7P01567 189 aa1.45□□□□□ -2.18
GAPVD1-211ENST00000467707 CYBAP13498 195 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms