RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 CRYGCP07315 174 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 OR13C7P0DN81 318 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 RNASE2P10153 161 aaKnown RBP11.91□□□□□ -0.5
TSSC4-208ENST00000467308 EIF2B2P49770 351 aaKnown RBP11.91□□□□□ -0.5
TSSC4-208ENST00000467308 SULT1A1P50225 295 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 SUB1P53999 127 aaKnown RBP eCLIP11.91□□□□□ -0.5
TSSC4-208ENST00000467308 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 LAMTOR1Q6IAA8 161 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
TSSC4-208ENST00000467308 TTC9CQ8N5M4 171 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 OR1L6Q8NGR2 347 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 GRPEL2Q8TAA5 225 aa11.91□□□□□ -0.5
TSSC4-208ENST00000467308 IGSF23A1L1A6 192 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 ANKRD34BA5PLL1 514 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 FAM24AA6NFZ4 105 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 IFNA10P01566 189 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 CSN3P07498 182 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 CTRB1P17538 263 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 CXCL2P19875 107 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 NPY1RP25929 384 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 SNCAP37840 140 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 RAB11AP62491 216 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 EWSR1Q01844 656 aaKnown RBP eCLIP11.9□□□□□ -0.5
TSSC4-208ENST00000467308 LGALSLQ3ZCW2 172 aaPredicted RBP11.9□□□□□ -0.5
TSSC4-208ENST00000467308 SPANXN5Q5MJ07 72 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 CTRB2Q6GPI1 263 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 STX12Q86Y82 276 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 OR1P1Q8NH06 330 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 TMEM170AQ8WVE7 144 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 RETNQ9HD89 108 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 PEF1Q9UBV8 284 aaKnown RBP11.9□□□□□ -0.5
TSSC4-208ENST00000467308 HSPB11Q9Y547 144 aa11.9□□□□□ -0.5
TSSC4-208ENST00000467308 PMS2P5A8MQ11 134 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 AREGP15514 252 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 C4BPBP20851 252 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 ZNF343Q6P1L6 599 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 OR5T1Q8NG75 326 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 OR2K2Q8NGT1 345 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
TSSC4-208ENST00000467308 GGACTQ9BVM4 153 aa11.89□□□□□ -0.51
TSSC4-208ENST00000467308 F11RQ9Y624 299 aaKnown RBP11.89□□□□□ -0.51
TSSC4-208ENST00000467308 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 H3BP45 60 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 TAAR5O14804 337 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 S100A11P31949 105 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 NKX2-5P52952 324 aaPredicted RBP11.88□□□□□ -0.51
TSSC4-208ENST00000467308 HBG1P69891 147 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 HBG2P69892 147 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
TSSC4-208ENST00000467308 USMG5Q96IX5 58 aa11.88□□□□□ -0.51
TSSC4-208ENST00000467308 IZUMO1RA6ND01 250 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 FNDC10F2Z333 226 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 CORTO00230 105 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 CYB5BO43169 146 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 METTL15P1P0C7V9 234 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 NHLH2Q02577 135 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 ATP6V1FQ16864 119 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 RPEL1Q2QD12 228 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 TMUB2Q71RG4 321 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 OR10P1Q8NGE3 313 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 CACNG8Q8WXS5 425 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 FAM110AQ9BQ89 295 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 PEMTQ9UBM1 199 aa11.87□□□□□ -0.51
TSSC4-208ENST00000467308 CST7O76096 145 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 TRBV12-3P01733 135 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 CD81P60033 236 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 OR1S2Q8NGQ3 325 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 KRTAP17-1Q9BYP8 105 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 ARL6Q9H0F7 186 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 ZC4H2Q9NQZ6 224 aa11.86□□□□□ -0.51
TSSC4-208ENST00000467308 FRAS1Q86XX4 4008 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 BCL2L11O43521 198 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 IFNA4P05014 189 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 HIST1H1BP16401 226 aaKnown RBP11.85□□□□□ -0.51
TSSC4-208ENST00000467308 GPX4P36969 197 aaPredicted RBP11.85□□□□□ -0.51
TSSC4-208ENST00000467308 AP2S1P53680 142 aaPredicted RBP11.85□□□□□ -0.51
TSSC4-208ENST00000467308 MFAP2P55001 183 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 DLK1P80370 383 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 ARL16Q0P5N6 197 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
TSSC4-208ENST00000467308 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 OR5C1Q8NGR4 320 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 ARPC5LQ9BPX5 153 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 FBXL17Q9UF56 701 aa11.85□□□□□ -0.51
TSSC4-208ENST00000467308 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 TRBV9A0A0B4J1U6 114 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 RBMY1BA6NDE4 496 aaKnown RBP11.84□□□□□ -0.51
TSSC4-208ENST00000467308 RBMY1EA6NEQ0 496 aaKnown RBP11.84□□□□□ -0.51
TSSC4-208ENST00000467308 DFFBO76075 338 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 REG1AP05451 166 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 RBMY1DP0C7P1 496 aaKnown RBP11.84□□□□□ -0.51
TSSC4-208ENST00000467308 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 FANCD2OSQ96PS1 177 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 ATP5SQ99766 215 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 PARD6GQ9BYG4 376 aaPredicted RBP11.84□□□□□ -0.51
TSSC4-208ENST00000467308 DMRT1Q9Y5R6 373 aa11.84□□□□□ -0.51
TSSC4-208ENST00000467308 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
TSSC4-208ENST00000467308 APELAP0DMC3 54 aa11.83□□□□□ -0.52
TSSC4-208ENST00000467308 DEFA4P12838 97 aa11.83□□□□□ -0.52
TSSC4-208ENST00000467308 DEFA5Q01523 94 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms