RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MPDU1O75352 247 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 IFNA10P01566 189 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 CD74P04233 296 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 TYMSP04818 313 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 P0DMU3 169 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 FAM231AP0DMU4 169 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 FAM231CP0DMU5 169 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 ATF1P18846 271 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 RAB3AP20336 220 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 SERPINA2P20848 420 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 C4BPBP20851 252 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 FGF9P31371 208 aaPredicted RBP3.97□□□□□ -1.77
PTCD3-207ENST00000467273 HCCSP53701 268 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 NANOS2P60321 138 aaKnown RBP3.97□□□□□ -1.77
PTCD3-207ENST00000467273 PLGLAQ15195 96 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 ATP6AP1Q15904 470 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 DEFB135Q30KP9 77 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 CT45A1Q5HYN5 189 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 OR10J3Q5JRS4 329 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 OR8G2PQ6IF36 304 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 NR2C2APQ86WQ0 139 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 NIT1Q86X76 327 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 CT45A3Q8NHU0 189 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 GHSRQ92847 366 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 OR10C1Q96KK4 312 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 RDH12Q96NR8 316 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 CLCC1Q96S66 551 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 APOL4Q9BPW4 351 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 TCEAL7Q9BRU2 100 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 NIPSNAP3BQ9BS92 247 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 ARV1Q9H2C2 271 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 S100A14Q9HCY8 104 aa3.97□□□□□ -1.77
PTCD3-207ENST00000467273 AK6Q9Y3D8 172 aaKnown RBP3.97□□□□□ -1.77
PTCD3-207ENST00000467273 DNAH6Q9C0G6 4158 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 TINCRA0A1B0GVN0 87 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 LOC107986453A0A1B0GWG9 222 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 OR5H14A6NHG9 310 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 IGLL5B9A064 214 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ZNF670-ZNF695F2Z2N8 137 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 LGALS9O00182 355 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ARPC2O15144 300 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 LIMS3P0CW19 117 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 LIMS4P0CW20 117 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 HSD17B1P14061 328 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 FOLR2P14207 255 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ATP6V1B2P21281 511 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 F2RP25116 425 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 RAB2AP61019 212 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
PTCD3-207ENST00000467273 CDK5Q00535 292 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 NHLRC3Q5JS37 347 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 FFAR4Q5NUL3 377 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 TMEM244Q5VVB8 128 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ZNF497Q6ZNH5 498 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ZNF833PQ6ZTB9 187 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 LINC00596Q86U02 117 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 POM121L12Q8N7R1 296 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 OR11H4Q8NGC9 324 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ADAT3Q96EY9 351 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-207ENST00000467273 SULT4A1Q9BR01 284 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 MIXL1Q9H2W2 232 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 SCRT2Q9NQ03 307 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 ZNF355PQ9NSJ1 428 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 MCUBQ9NWR8 336 aa3.96□□□□□ -1.78
PTCD3-207ENST00000467273 DYNC1H1Q14204 4646 aaKnown RBP3.96□□□□□ -1.78
PTCD3-207ENST00000467273 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 C9orf170A2RU37 121 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 C2orf70A6NJV1 201 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FAM223BA6NKX1 122 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 C16orf90A8MZG2 172 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 PPP5D1E7EU14 171 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FCN1O00602 326 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 EIF3GO75821 320 aaKnown RBP eCLIP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 S1PR2O95136 353 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 OXTP01178 125 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MRPL3P09001 348 aaKnown RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 SCTP09683 121 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 OR10J4P0C629 311 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 PVALBP20472 110 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MT3P25713 68 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 LGALS7P47929 136 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MFAP2P55001 183 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 XGP55808 180 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 TAS2R31P59538 309 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 GINS1Q14691 196 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MPV17LQ2QL34 196 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MORN2Q502X0 79 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 PHLDA2Q53GA4 152 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 SYT6Q5T7P8 510 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 GLT8D1Q68CQ7 371 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 ZNF57Q68EA5 555 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 PVRIGQ6DKI7 326 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FAM19A1Q7Z5A9 133 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 C5orf24Q7Z6I8 188 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FAM223AQ8IWN6 122 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 SUMF2Q8NBJ7 301 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FGGYQ96C11 551 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 RNF126Q9BV68 326 aa3.95□□□□□ -1.78
PTCD3-207ENST00000467273 MRPL20Q9BYC9 149 aaKnown RBP3.95□□□□□ -1.78
PTCD3-207ENST00000467273 FBXL15Q9H469 300 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms